Stem-loop sequence mmu-mir-292a

AccessionMI0000390 (change log)
Previous IDsmmu-mir-292
DescriptionMus musculus miR-292 stem-loop
Gene family MIPF0000068; mir-290
Literature search

16 open access papers mention mmu-mir-292a
(143 sentences)

        u           --a    g   u    ugga     a 
5' cagcc gugauacucaa   cugg ggc cuuu    uuuuc u
   ||||| |||||||||||   |||| ||| ||||    |||||  
3' guugg cacugugaguu   gacc ccg gaaa    agaag c
        c           uug    g   u    ----     g 
Get sequence
Deep sequencing
57738 reads, 492 reads per million, 52 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. The 5' end of the miRNA may be offset with respect to previous annotations.

Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr7: 3219189-3219270 [+]
Clustered miRNAs
< 10kb from mmu-mir-292a
mmu-mir-290achr7: 3218626-3218708 [+]
mmu-mir-290bchr7: 3218638-3218695 [-]
mmu-mir-291achr7: 3218919-3219000 [+]
mmu-mir-292achr7: 3219189-3219270 [+]
mmu-mir-292bchr7: 3219198-3219259 [-]
mmu-mir-291bchr7: 3219482-3219560 [+]
mmu-mir-293chr7: 3220343-3220422 [+]
mmu-mir-294chr7: 3220641-3220724 [+]
mmu-mir-295chr7: 3220773-3220841 [+]
Database links

Mature sequence mmu-miR-292a-5p

Accession MIMAT0000369
Previous IDsmmu-miR-292-5p

12 - 


 - 33

Get sequence
Deep sequencing13305 reads, 43 experiments
Evidence experimental; cloned [1-2], Northern [1], Illumina [3-4]
Database links
Predicted targets

Mature sequence mmu-miR-292a-3p

Accession MIMAT0000370
Previous IDsmmu-miR-292-3p

50 - 


 - 73

Get sequence
Deep sequencing44425 reads, 45 experiments
Evidence experimental; cloned [1-2], Northern [1], Illumina [3-4]
Database links
Predicted targets


PMID:12919684 "Embryonic stem cell-specific MicroRNAs" Houbaviy HB, Murray MF, Sharp PA Dev Cell. 5:351-358(2003).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).