miRBase entry: mmu-mir-187

Stem-loop mmu-mir-187


Accession
MI0000229
Symbol
MGI: Mir187
Description
Mus musculus mmu-mir-187 precursor miRNA
Gene family
MIPF0000078; mir-187

Literature search
22 open access papers mention mmu-mir-187
(123 sentences)

Sequence

17956 reads, 90 reads per million, 87 experiments
ucAGGCUACAACACAGGACCCGGGcgcugcucugaccccUCGUGUCUUGUGUUGCAGCCGG
...((((.(((((((((((.((((.((......).).)).)).))))))))))).))))..

Structure
ucA    A           C  -  c - ug 
   GGCU CAACACAGGAC CG GG g c  c
   |||| ||||||||||| || || | |   
   CCGA GUUGUGUUCUG GC cc c g  u
-GG    C           U  U  c a uc 


Annotation confidence High
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Genome context
chr18: 24429110-24429170 [-]

Database links

Mature mmu-miR-187-5p

Accession MIMAT0016997
Description Mus musculus mmu-miR-187-5p mature miRNA
Sequence 3 - AGGCUACAACACAGGACCCGGG - 24
Evidence experimental
Illumina [4]
Database links
Predicted targets

Mature mmu-miR-187-3p

Accession MIMAT0000216
Description Mus musculus mmu-miR-187-3p mature miRNA
Sequence 40 - UCGUGUCUUGUGUUGCAGCCGG - 61
Evidence experimental
cloned [1-2], Illumina [3-4]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 12554859
    New microRNAs from mouse and human
    "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
    "RNA (2003) 9:175-179

  3. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  4. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009