![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence cel-mir-2 |
||||||
Accession | MI0000004 (change log) | |||||
Description | Caenorhabditis elegans miR-2 stem-loop | |||||
Gene family | MIPF0000049; mir-2 | |||||
Literature search |
![]()
9 open access papers mention cel-mir-2 | |||||
Stem-loop |
uaa -au aa - - ggu -uu - a 5' acagu acag agc caucaaagc ggu ugaugug g ca a ||||| |||| ||| ||||||||| ||| ||||||| | || u 3' uguca uguc ucg guaguuucg ccg acuauac c gu u --- cgu cg u a -ac uuu a a |
|||||
Deep sequencing |
| |||||
Confidence |
Annotation confidence: high
| |||||
Genome context |
|
|||||
Clustered miRNAs |
|
|||||
Database links |
|
Mature sequence cel-miR-2-5p |
|
Accession | MIMAT0020302 |
Previous IDs | cel-miR-2* |
Sequence |
20 - caucaaagcggugguugaugug - 41 |
Deep sequencing | 1531 reads, 16 experiments |
Evidence | experimental; Illumina [9] |
Database links |
|
Mature sequence cel-miR-2-3p |
|
Accession | MIMAT0000004 |
Previous IDs | cel-miR-2 |
Sequence |
61 - uaucacagccagcuuugaugugc - 83 |
Deep sequencing | 48497 reads, 19 experiments |
Evidence | experimental; cloned [1-4], PCR [5], 454 [6], Illumina [7,9], CLIPseq [8] |
Database links |
|
Predicted targets |
|
References |
|
1 |
PMID:11679671
"An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans"
Science. 294:858-862(2001).
|
2 |
PMID:11679672
"An extensive class of small RNAs in Caenorhabditis elegans"
Science. 294:862-864(2001).
|
3 |
PMID:12672692
"The microRNAs of Caenorhabditis elegans"
Genes Dev. 17:991-1008(2003).
|
4 |
PMID:12747828
"MicroRNAs and other tiny endogenous RNAs in C. elegans"
Curr Biol. 13:807-818(2003).
|
5 |
PMID:12769849
"Computational and experimental identification of C. elegans microRNAs"
Mol Cell. 11:1253-1263(2003).
|
6 |
PMID:17174894
"Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans"
Cell. 127:1193-1207(2006).
|
7 | |
8 |
PMID:20062054
"Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans"
Nat Struct Mol Biol. 17:173-179(2010).
|
9 |