1. MicroRNA 157-targeted SPL genes regulate floral organ size and ovule production in cotton
   Liu N, Tu L, Wang L, Hu H, Xu J, Zhang X
   BMC Plant Biol (2017) 17:7
2. Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton
   Xie F, Wang Q, Sun R, Zhang B
   J Exp Bot (2015) 66:789-804
3. Genome-wide analysis of small RNA and novel microRNA discovery during fiber and seed initial development in Gossypium hirsutum. L
   Zhang H, Wan Q, Ye W, Lv Y, Wu H, Zhang T
   PLoS One (2013) 8:e69743
4. Comparative expression profiling of miRNA during anther development in genetic male sterile and wild type cotton
   Wei M, Wei H, Wu M, Song M, Zhang J, Yu J, Fan S, Yu S
   BMC Plant Biol (2013) 13:66
5. Genome-wide identification and characterization of SPL transcription factor family and their evolution and expression profiling analysis in cotton
   Cai C, Guo W, Zhang B
   Sci Rep (2018) 8:762
6. Changes in DNA methylation assessed by genomic bisulfite sequencing suggest a role for DNA methylation in cotton fruiting branch development
   Sun Q, Qiao J, Zhang S, He S, Shi Y, Yuan Y, Zhang X, Cai Y
   PeerJ (2018) 6:e4945
7. Comprehensive analysis of differentially expressed genes and transcriptional regulation induced by salt stress in two contrasting cotton genotypes
   Peng Z, He S, Gong W, Sun J, Pan Z, Xu F, Lu Y, Du X
   BMC Genomics (2014) 15:760
8. MicroRNA expression profiles during cotton (Gossypium hirsutum L) fiber early development
   Wang M, Sun R, Li C, Wang Q, Zhang B
   Sci Rep (2017) 7:44454
9. Comparative Analysis of Cotton Small RNAs and Their Target Genes in Response to Salt Stress
   Yin Z, Han X, Li Y, Wang J, Wang D, Wang S, Fu X, Ye W
   Genes (Basel) (2017) 8
10. Identification and Characterization of miRNA Transcriptome in Asiatic Cotton (<i>Gossypium arboreum</i>) Using High Throughput Sequencing
    Farooq M, Mansoor S, Guo H, Amin I, Chee PW, Azim MK, Paterson AH
    Front Plant Sci (2017) 8:969
11. Enrichment of a set of microRNAs during the cotton fiber development
    Kwak PB, Wang QQ, Chen XS, Qiu CX, Yang ZM
    BMC Genomics (2009) 10:457
12. Small RNA sequencing and degradome analysis of developing fibers of short fiber mutants Ligon-lintles-1 (Li 1 ) and -2 (Li 2 ) revealed a role for miRNAs and their targets in cotton fiber elongation
    Naoumkina M, Thyssen GN, Fang DD, Hinchliffe DJ, Florane CB, Jenkins JN
    BMC Genomics (2016) 17:360
13. Integration of proteomic and transcriptomic profiles reveals multiple levels of genetic regulation of salt tolerance in cotton
    Peng Z, He S, Gong W, Xu F, Pan Z, Jia Y, Geng X, Du X
    BMC Plant Biol (2018) 18:128
14. Identification of miRNAs and Their Targets in Cotton Inoculated with Verticillium dahliae by High-Throughput Sequencing and Degradome Analysis
    Zhang Y, Wang W, Chen J, Liu J, Xia M, Shen F
    Int J Mol Sci (2015) 16:14749-14768
15. Genome-wide profiling of miRNAs and other small non-coding RNAs in the Verticillium dahliae-inoculated cotton roots
    Yin Z, Li Y, Han X, Shen F
    PLoS One (2012) 7:e35765
16. Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629
17. Genetics and Genomics of Cotton Leaf Curl Disease, Its Viral Causal Agents and Whitefly Vector: A Way Forward to Sustain Cotton Fiber Security
    Rahman MU, Khan AQ, Rahmat Z, Iqbal MA, Zafar Y
    Front Plant Sci (2017) 8:1157
18. To Be a Flower or Fruiting Branch: Insights Revealed by mRNA and Small RNA Transcriptomes from Different Cotton Developmental Stages
    Sun Q, Du X, Cai C, Long L, Zhang S, Qiao P, Wang W, Zhou K, Wang G, Liu X, Zhang H, Geng S, Yang C, Gao W, Mo J, Miao C, Song C, Cai Y
    Sci Rep (2016) 6:23212
19. Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)
    Pang M, Woodward AW, Agarwal V, Guan X, Ha M, Ramachandran V, Chen X, Triplett BA, Stelly DM, Chen ZJ
    Genome Biol (2009) 10:R122
20. Genome-wide functional analysis of the cotton transcriptome by creating an integrated EST database
    Xie F, Sun G, Stiller JW, Zhang B
    PLoS One (2011) 6:e26980
21. Identification of novel microRNAs in the Verticillium wilt-resistant upland cotton variety KV-1 by high-throughput sequencing
    He X, Sun Q, Jiang H, Zhu X, Mo J, Long L, Xiang L, Xie Y, Shi Y, Yuan Y, Cai Y
    Springerplus (2014) 3:564
22. Differential expression of microRNAs during fiber development between fuzzless-lintless mutant and its wild-type allotetraploid cotton
    Sun R, Li C, Zhang J, Li F, Ma L, Tan Y, Wang Q, Zhang B
    Sci Rep (2017) 7:3
23. The Complexity of Posttranscriptional Small RNA Regulatory Networks Revealed by In Silico Analysis of Gossypium arboreum L. Leaf, Flower and Boll Small Regulatory RNAs
    Hu H, Rashotte AM, Singh NK, Weaver DB, Goertzen LR, Singh SR, Locy RD
    PLoS One (2015) 10:e0127468
24. Methodologies for in vitro cloning of small RNAs and application for plant genome(s)
    Devor EJ, Huang L, Abdukarimov A, Abdurakhmonov IY
    Int J Plant Genomics (2009) 2009:915061
25. microRNAs as reference genes for quantitative PCR in cotton
    Fausto AKS, Silva TDF, Romanel E, Vaslin MFS
    PLoS One (2017) 12:e0174722
26. Small RNA-mediated responses to low- and high-temperature stresses in cotton
    Wang Q, Liu N, Yang X, Tu L, Zhang X
    Sci Rep (2016) 6:35558
27. Response and Tolerance Mechanism of Cotton Gossypium hirsutum L. to Elevated Temperature Stress: A Review
    Zahid KR, Ali F, Shah F, Younas M, Shah T, Shahwar D, Hassan W, Ahmad Z, Qi C, Lu Y, Iqbal A, Wu W
    Front Plant Sci (2016) 7:937
28. Identification and characterization of microRNAs in Asiatic cotton (Gossypium arboreum L.)
    Wang M, Wang Q, Wang B
    PLoS One (2012) 7:e33696
29. Expression of small RNA in Aphis gossypii and its potential role in the resistance interaction with melon
    Sattar S, Addo-Quaye C, Song Y, Anstead JA, Sunkar R, Thompson GA
    PLoS One (2012) 7:e48579
30. RNA Interference for Functional Genomics and Improvement of Cotton (Gossypium sp.)
    Abdurakhmonov IY, Ayubov MS, Ubaydullaeva KA, Buriev ZT, Shermatov SE, Ruziboev HS, Shapulatov UM, Saha S, Ulloa M, Yu JZ, Percy RG, Devor EJ, Sharma GC, Sripathi VR, Kumpatla SP, van der Krol A, Kater HD, Khamidov K, Salikhov SI, Jenkins JN, Abdukarimov
    Front Plant Sci (2016) 7:202
31. Transcriptomic repertoires depict the initiation of lint and fuzz fibres in cotton (Gossypium hirsutum L.)
    Hu H, Wang M, Ding Y, Zhu S, Zhao G, Tu L, Zhang X
    Plant Biotechnol J (2018) 16:1002-1012
32. Identification and Functional Analysis of microRNAs Involved in the Anther Development in Cotton Genic Male Sterile Line Yu98-8A
    Yang X, Zhao Y, Xie D, Sun Y, Zhu X, Esmaeili N, Yang Z, Wang Y, Yin G, Lv S, Nie L, Tang Z, Zhao F, Li W, Mishra N, Sun L, Zhu W, Fang W
    Int J Mol Sci (2016) 17
33. Genome-Wide Identification of the MIKC-Type MADS-Box Gene Family in <i>Gossypium hirsutum</i> L. Unravels Their Roles in Flowering
    Ren Z, Yu D, Yang Z, Li C, Qanmber G, Li Y, Li J, Liu Z, Lu L, Wang L, Zhang H, Chen Q, Li F, Yang Z
    Front Plant Sci (2017) 8:384