1 Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988
score: 40

Other hairpins from this paper: bmo-bantam, bmo-let-7, bmo-mir-100, bmo-mir-13a, bmo-mir-13b, bmo-mir-184, bmo-mir-2756, bmo-mir-2766, bmo-mir-279a, bmo-mir-279b, bmo-mir-279c, bmo-mir-279d, bmo-mir-279e, bmo-mir-281, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-305, bmo-mir-307, bmo-mir-317, bmo-mir-34, bmo-mir-7, bmo-mir-71, bmo-mir-92a, bmo-mir-92b, bmo-mir-932, bmo-mir-9a, dme-bantam, dme-let-7, dme-mir-100, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-184, dme-mir-279, dme-mir-281-1, dme-mir-281-2, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-307a, dme-mir-307b, dme-mir-317, dme-mir-34, dme-mir-7, dme-mir-92a, dme-mir-92b, dme-mir-932, dme-mir-9a, sfr-mir-10463, sfr-mir-10471, sfr-mir-10494, sfr-mir-13a, sfr-mir-13b, sfr-mir-2756, sfr-mir-2766, sfr-mir-279a, sfr-mir-279b, sfr-mir-279c, sfr-mir-281, sfr-mir-2a, sfr-mir-2b, sfr-mir-2c, sfr-mir-307, sfr-mir-317, sfr-mir-34, sfr-mir-7, sfr-mir-92a, sfr-mir-932,


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2 In vivo analysis of internal ribosome entry at the Hairless locus by genome engineering in Drosophila
Smylla TK, Preiss A, Maier D
Sci Rep (2016) 6:34881
score: 7

Other hairpins from this paper: dme-mir-305,


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3 Evidence for post-transcriptional regulation of clustered microRNAs in Drosophila
Ryazansky SS, Gvozdev VA, Berezikov E
BMC Genomics (2011) 12:371
score: 6

Other hairpins from this paper: dme-let-7, dme-mir-100, dme-mir-12, dme-mir-125, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-275, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2c, dme-mir-304, dme-mir-305, dme-mir-306, dme-mir-310, dme-mir-34, dme-mir-6-1, dme-mir-960, dme-mir-983-1, dme-mir-983-2, dme-mir-991, dme-mir-992,


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4 Identification and characteristics of microRNAs from Bombyx mori
He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y
BMC Genomics (2008) 9:248
score: 5

Other hairpins from this paper: bmo-bantam, bmo-let-7, bmo-mir-100, bmo-mir-133, bmo-mir-13a, bmo-mir-13b, bmo-mir-14, bmo-mir-184, bmo-mir-1a, bmo-mir-1b, bmo-mir-263a, bmo-mir-263b, bmo-mir-275, bmo-mir-277, bmo-mir-279a, bmo-mir-279b, bmo-mir-279c, bmo-mir-279d, bmo-mir-279e, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-305, bmo-mir-31, bmo-mir-7, bmo-mir-71, bmo-mir-8, bmo-mir-9a, bmo-mir-9b, bmo-mir-9c, bmo-mir-9d, dme-bantam, dme-let-7, dme-mir-1, dme-mir-100, dme-mir-133, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-14, dme-mir-184, dme-mir-263a, dme-mir-263b, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-279, dme-mir-289, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-31a, dme-mir-31b, dme-mir-7, dme-mir-8, dme-mir-9a, dme-mir-9b, dme-mir-9c,


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5 Computational and transcriptional evidence for microRNAs in the honey bee genome
Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
Genome Biol (2007) 8:R97
score: 5

Other hairpins from this paper: ame-let-7, ame-mir-1-1, ame-mir-1-2, ame-mir-100, ame-mir-12, ame-mir-133, ame-mir-137, ame-mir-13a, ame-mir-13b, ame-mir-190, ame-mir-2-1, ame-mir-2-2, ame-mir-2-3, ame-mir-275, ame-mir-276, ame-mir-277, ame-mir-279a, ame-mir-279b, ame-mir-279c, ame-mir-279d, ame-mir-283, ame-mir-2b, ame-mir-305, ame-mir-317, ame-mir-34, ame-mir-375, ame-mir-7, ame-mir-71, ame-mir-79, ame-mir-927a, ame-mir-927b, ame-mir-92a, ame-mir-92b-1, ame-mir-92b-2, ame-mir-92c, ame-mir-932, ame-mir-9a, ame-mir-9b, dme-let-7, dme-mir-1, dme-mir-100, dme-mir-12, dme-mir-133, dme-mir-137, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-190, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-279, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-317, dme-mir-34, dme-mir-375, dme-mir-7, dme-mir-79, dme-mir-927, dme-mir-92a, dme-mir-92b, dme-mir-932, dme-mir-9a, dme-mir-9b,


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6 Selection Against Maternal microRNA Target Sites in Maternal Transcripts
Marco A
G3 (Bethesda) (2015) 5:2199-2207
score: 4

Other hairpins from this paper: dme-bantam, dme-let-7, dme-mir-10, dme-mir-1010, dme-mir-1012, dme-mir-11, dme-mir-13b-2, dme-mir-14, dme-mir-184, dme-mir-263a, dme-mir-276a, dme-mir-277, dme-mir-279, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2b-2, dme-mir-305, dme-mir-306, dme-mir-310, dme-mir-311, dme-mir-312, dme-mir-313, dme-mir-318, dme-mir-31a, dme-mir-33, dme-mir-34, dme-mir-3644, dme-mir-4941, dme-mir-4944, dme-mir-4963, dme-mir-4967, dme-mir-4972, dme-mir-4979, dme-mir-4982, dme-mir-4985, dme-mir-4986, dme-mir-8, dme-mir-92a, dme-mir-92b, dme-mir-956, dme-mir-970, dme-mir-995, dme-mir-999, dme-mir-9a, dme-mir-9b, dme-mir-9c,


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7 Generation of New Hairless Alleles by Genomic Engineering at the Hairless Locus in Drosophila melanogaster
Praxenthaler H, Smylla TK, Nagel AC, Preiss A, Maier D
PLoS One (2015) 10:e0140007
score: 3

Other hairpins from this paper: dme-mir-305,


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8 Control of Drosophila Type I and Type II central brain neuroblast proliferation by bantam microRNA
Weng R, Cohen SM
Development (2015) 142:3713-3720
score: 2

Other hairpins from this paper: dme-bantam, dme-mir-124, dme-mir-184, dme-mir-275, dme-mir-2b-1, dme-mir-2b-2, dme-mir-305, dme-mir-306, gga-mir-124a, gga-mir-124a-2, gga-mir-124b, gga-mir-124c, gga-mir-184, gga-mir-99a, rno-mir-124-1, rno-mir-124-2, rno-mir-124-3, rno-mir-184, rno-mir-99a,


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9 Comparative analysis of miRNA expression during the development of insects of different metamorphosis modes and germ-band types
Ylla G, Piulachs MD, Belles X
BMC Genomics (2017) 18:774
score: 1

Other hairpins from this paper: dme-bantam, dme-let-7, dme-mir-1, dme-mir-10, dme-mir-252, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-278, dme-mir-279, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-3, dme-mir-305, dme-mir-309, dme-mir-31a, dme-mir-31b, dme-mir-34, dme-mir-5, dme-mir-8, dme-mir-92a, dme-mir-92b, dme-mir-9a, dme-mir-9b, dme-mir-9c, dvi-bantam, dvi-let-7, dvi-mir-1, dvi-mir-10, dvi-mir-252, dvi-mir-276a, dvi-mir-276b, dvi-mir-277, dvi-mir-278, dvi-mir-279, dvi-mir-2a-1, dvi-mir-2a-2, dvi-mir-2b, dvi-mir-2c, dvi-mir-3, dvi-mir-305, dvi-mir-309, dvi-mir-31a, dvi-mir-31b, dvi-mir-34, dvi-mir-5, dvi-mir-8, dvi-mir-92a, dvi-mir-92b, dvi-mir-9a, dvi-mir-9b, dvi-mir-9c, tca-bantam, tca-let-7, tca-mir-1, tca-mir-10, tca-mir-2-1, tca-mir-2-2, tca-mir-2-3, tca-mir-252a, tca-mir-252b, tca-mir-276, tca-mir-277, tca-mir-279a, tca-mir-279b, tca-mir-279c, tca-mir-279d, tca-mir-279e, tca-mir-29, tca-mir-305, tca-mir-309a, tca-mir-309b, tca-mir-309c, tca-mir-31, tca-mir-34, tca-mir-71, tca-mir-8, tca-mir-92a, tca-mir-92b, tca-mir-92c, tca-mir-9a, tca-mir-9b, tca-mir-9c, tca-mir-9d, tca-mir-9e,


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10 Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
Genome Biol Evol (2016) 8:2133-2144
score: 1

Other hairpins from this paper: dme-let-7, dme-mir-10, dme-mir-100, dme-mir-124, dme-mir-125, dme-mir-133, dme-mir-137, dme-mir-14, dme-mir-193, dme-mir-219, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-279, dme-mir-281-1, dme-mir-281-2, dme-mir-282, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-31a, dme-mir-31b, dme-mir-33, dme-mir-8, dme-mir-92a, dme-mir-965, dme-mir-981, pte-iab-4-1, pte-iab-4-2, pte-let-7, pte-mir-10, pte-mir-100a, pte-mir-100b, pte-mir-11942a, pte-mir-11942b, pte-mir-11942c, pte-mir-11942d, pte-mir-11951a, pte-mir-11951b, pte-mir-11960, pte-mir-11961a, pte-mir-11961b, pte-mir-11961c, pte-mir-125a, pte-mir-125b, pte-mir-14, pte-mir-193a, pte-mir-193b, pte-mir-275, pte-mir-276-1, pte-mir-276-2, pte-mir-278b, pte-mir-279, pte-mir-281, pte-mir-2a, pte-mir-2b-1, pte-mir-2b-2, pte-mir-2c, pte-mir-2d, pte-mir-2e, pte-mir-2f, pte-mir-2g-1, pte-mir-2g-2, pte-mir-305, pte-mir-3477, pte-mir-3931, pte-mir-71-1, pte-mir-71-2, pte-mir-8, pte-mir-92a, pte-mir-96, pte-mir-981, pte-mir-993a, pte-mir-993b-1, pte-mir-993b-2,


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11 The exonuclease Nibbler regulates age-associated traits and modulates piRNA length in Drosophila
Feltzin VL, Khaladkar M, Abe M, Parisi M, Hendriks GJ, Kim J, Bonini NM
Aging Cell (2015) 14:443-452
score: 1

Other hairpins from this paper: dme-let-7, dme-mir-305, dme-mir-34,


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12 Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila
Gu J, Fu H, Zhang X, Li Y
BMC Bioinformatics (2007) 8:432
score: 1

Other hairpins from this paper: dme-let-7, dme-mir-10, dme-mir-12, dme-mir-133, dme-mir-219, dme-mir-263a, dme-mir-274, dme-mir-281-2, dme-mir-282, dme-mir-283, dme-mir-285, dme-mir-286, dme-mir-2a-2, dme-mir-2c, dme-mir-305, dme-mir-309, dme-mir-310, dme-mir-311, dme-mir-316, dme-mir-31a, dme-mir-31b, dme-mir-34, dme-mir-5, dme-mir-7, dme-mir-79, dme-mir-8, dme-mir-9a, dme-mir-9c,


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