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Threshold-dependent repression of SPL gene expression by miR156/miR157 controls vegetative phase change in Arabidopsis thaliana
He J, Xu M, Willmann MR, McCormick K, Hu T, Yang L, Starker CG, Voytas DF, Meyers BC, Poethig RS PLoS Genet (2018) 14:e1007337
score: 441
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e,
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Developmental Functions of miR156-Regulated SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) Genes in Arabidopsis thaliana
Xu M, Hu T, Zhao J, Park MY, Earley KW, Wu G, Yang L, Poethig RS PLoS Genet (2016) 12:e1006263
score: 370
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR171b, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e,
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Functional and evolutionary analyses of the miR156 and miR529 families in land plants
Morea EG, da Silva EM, e Silva GF, Valente GT, Barrera Rojas CH, Vincentz M, Nogueira FT BMC Plant Biol (2016) 16:40
score: 210
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j,
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Comparative transcriptome investigation of global gene expression changes caused by miR156 overexpression in Medicago sativa
Gao R, Austin RS, Amyot L, Hannoufa A BMC Genomics (2016) 17:658
score: 191
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, mtr-MIR156a, mtr-MIR156b, mtr-MIR156c, mtr-MIR156d, mtr-MIR156e, mtr-MIR156f, mtr-MIR156g, mtr-MIR156h, mtr-MIR156i, mtr-MIR156j, mtr-MIR172a, mtr-MIR172b, mtr-MIR172c, mtr-MIR172d,
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Comparative analysis of molecular and physiological traits between perennial Arabis alpina Pajares and annual Arabidopsis thaliana Sy-0
Park JY, Kim H, Lee I Sci Rep (2017) 7:13348
score: 150
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j,
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Interaction between two timing microRNAs controls trichome distribution in Arabidopsis
Xue XY, Zhao B, Chao LM, Chen DY, Cui WR, Mao YB, Wang LJ, Chen XY PLoS Genet (2014) 10:e1004266
score: 138
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR170, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e,
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Lipopolysaccharide perception leads to dynamic alterations in the microtranscriptome of Arabidopsis thaliana cells and leaf tissues
Djami-Tchatchou AT, Dubery IA BMC Plant Biol (2015) 15:79
score: 64
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR158a, ath-MIR158b, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR161, ath-MIR165a, ath-MIR165b, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR168a, ath-MIR168b, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR2934, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR393a, ath-MIR393b, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR396a, ath-MIR396b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR401, ath-MIR402, ath-MIR403, ath-MIR405a, ath-MIR405b, ath-MIR405d, ath-MIR408, ath-MIR5029, ath-MIR5635a, ath-MIR5635b, ath-MIR5635c, ath-MIR5635d, ath-MIR5638a, ath-MIR5638b, ath-MIR5642a, ath-MIR5642b, ath-MIR773a, ath-MIR773b, ath-MIR782, ath-MIR829, ath-MIR843,
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Interplay between sugar and hormone signaling pathways modulate floral signal transduction
Matsoukas IG Front Genet (2014) 5:218
score: 44
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e,
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Genome-wide identification and characterization of SPL transcription factor family and their evolution and expression profiling analysis in cotton
Cai C, Guo W, Zhang B Sci Rep (2018) 8:762
score: 39
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ghr-MIR156a, ghr-MIR156b, ghr-MIR156c, ghr-MIR156d, gra-MIR157a, gra-MIR157b,
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Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing
Liu H, Qin C, Chen Z, Zuo T, Yang X, Zhou H, Xu M, Cao S, Shen Y, Lin H, He X, Zhang Y, Li L, Ding H, Lübberstedt T, Zhang Z, Pan G BMC Genomics (2014) 15:25
score: 37
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR162a, ath-MIR162b, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR168a, ath-MIR168b, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR396a, ath-MIR396b, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR408, osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR156k, osa-MIR156l, osa-MIR159a, osa-MIR159b, osa-MIR159c, osa-MIR159d, osa-MIR159e, osa-MIR159f, osa-MIR160a, osa-MIR160b, osa-MIR160c, osa-MIR160d, osa-MIR160e, osa-MIR160f, osa-MIR162a, osa-MIR162b, osa-MIR164a, osa-MIR164b, osa-MIR164c, osa-MIR164d, osa-MIR164e, osa-MIR164f, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR166j, osa-MIR166k, osa-MIR166l, osa-MIR166m, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR167j, osa-MIR168a, osa-MIR168b, osa-MIR169a, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR169r, osa-MIR171h, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR172d, osa-MIR2118a, osa-MIR2118b, osa-MIR2118c, osa-MIR2118d, osa-MIR2118e, osa-MIR2118f, osa-MIR2118g, osa-MIR2118h, osa-MIR2118i, osa-MIR2118j, osa-MIR2118k, osa-MIR2118l, osa-MIR2118m, osa-MIR2118n, osa-MIR2118o, osa-MIR2118p, osa-MIR2118q, osa-MIR2118r, osa-MIR2275a, osa-MIR2275b, osa-MIR2275c, osa-MIR2275d, osa-MIR395a, osa-MIR395b, osa-MIR395c, osa-MIR395d, osa-MIR395e, osa-MIR395f, osa-MIR395g, osa-MIR395h, osa-MIR395i, osa-MIR395j, osa-MIR395k, osa-MIR395l, osa-MIR395m, osa-MIR395n, osa-MIR395o, osa-MIR395p, osa-MIR395q, osa-MIR395r, osa-MIR395s, osa-MIR395t, osa-MIR395u, osa-MIR395v, osa-MIR395w, osa-MIR395x, osa-MIR395y, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR396d, osa-MIR396e, osa-MIR396f, osa-MIR396g, osa-MIR396h, osa-MIR399a, osa-MIR399b, osa-MIR399c, osa-MIR399d, osa-MIR399e, osa-MIR399f, osa-MIR399g, osa-MIR399h, osa-MIR399i, osa-MIR399j, osa-MIR399k, osa-MIR408, osa-MIR529a, osa-MIR529b, zma-MIR156a, zma-MIR156b, zma-MIR156c, zma-MIR156d, zma-MIR156e, zma-MIR156f, zma-MIR156g, zma-MIR156h, zma-MIR156i, zma-MIR156j, zma-MIR156k, zma-MIR156l, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160a, zma-MIR160b, zma-MIR160c, zma-MIR160d, zma-MIR160e, zma-MIR160f, zma-MIR160g, zma-MIR162, zma-MIR164a, zma-MIR164b, zma-MIR164c, zma-MIR164d, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR166a, zma-MIR166b, zma-MIR166c, zma-MIR166d, zma-MIR166e, zma-MIR166f, zma-MIR166g, zma-MIR166h, zma-MIR166i, zma-MIR166j, zma-MIR166k, zma-MIR166l, zma-MIR166m, zma-MIR166n, zma-MIR167a, zma-MIR167b, zma-MIR167c, zma-MIR167d, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR167j, zma-MIR168a, zma-MIR168b, zma-MIR169a, zma-MIR169b, zma-MIR169c, zma-MIR169d, zma-MIR169e, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169j, zma-MIR169k, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR171h, zma-MIR172a, zma-MIR172b, zma-MIR172c, zma-MIR172d, zma-MIR172e, zma-MIR2118a, zma-MIR2118b, zma-MIR2118c, zma-MIR2118d, zma-MIR2118e, zma-MIR2118f, zma-MIR2118g, zma-MIR2275a, zma-MIR2275b, zma-MIR2275c, zma-MIR2275d, zma-MIR395a, zma-MIR395b, zma-MIR395c, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, zma-MIR396a, zma-MIR396b, zma-MIR396c, zma-MIR396d, zma-MIR396e, zma-MIR396f, zma-MIR396g, zma-MIR396h, zma-MIR399a, zma-MIR399b, zma-MIR399c, zma-MIR399d, zma-MIR399e, zma-MIR399f, zma-MIR399g, zma-MIR399h, zma-MIR399i, zma-MIR399j, zma-MIR408a, zma-MIR408b, zma-MIR529,
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11 |
Genetic and epigenetic control of plant heat responses
Liu J, Feng L, Li J, He Z Front Plant Sci (2015) 6:267
score: 36
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR168a, ath-MIR168b, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR396a, ath-MIR396b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR400, ath-MIR472, ath-MIR827,
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12 |
miR156- and miR171-binding sites in the protein-coding sequences of several plant genes
Bari A, Orazova S, Ivashchenko A Biomed Res Int (2013) 2013:307145
score: 35
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR170, ath-MIR171a, ath-MIR171b, ath-MIR171c,
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13 |
Improvement of enzymatic saccharification yield in Arabidopsis thaliana by ectopic expression of the rice SUB1A-1 transcription factor
Núñez-López L, Aguirre-Cruz A, Barrera-Figueroa BE, Peña-Castro JM PeerJ (2015) 3:e817
score: 32
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR156k, osa-MIR156l,
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14 |
A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana
Todesco M, Rubio-Somoza I, Paz-Ares J, Weigel D PLoS Genet (2010) 6:e1001031
score: 31
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR161, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR165a, ath-MIR165b, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR170, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR393a, ath-MIR393b, ath-MIR394a, ath-MIR394b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR834,
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Deep sequencing and microarray hybridization identify conserved and species-specific microRNAs during somatic embryogenesis in hybrid yellow poplar
Li T, Chen J, Qiu S, Zhang Y, Wang P, Yang L, Lu Y, Shi J PLoS One (2012) 7:e43451
score: 27
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR162a, ath-MIR162b, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR165a, ath-MIR165b, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR168a, ath-MIR168b, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR170, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR390a, ath-MIR390b, ath-MIR396a, ath-MIR396b, ath-MIR397a, ath-MIR397b, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR408,
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Meristem identity and phyllotaxis in inflorescence development
Bartlett ME, Thompson B Front Plant Sci (2014) 5:508
score: 25
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157b, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, sly-MIR156a, sly-MIR156b, sly-MIR156c, sly-MIR156d, sly-MIR156e, sly-MIR172a, sly-MIR172b, sly-MIR172c, sly-MIR172d,
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17 |
AtmiRNET: a web-based resource for reconstructing regulatory networks of Arabidopsis microRNAs
Chien CH, Chiang-Hsieh YF, Chen YA, Chow CN, Wu NY, Hou PF, Chang WC Database (Oxford) (2015) 2015:bav042
score: 25
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR5630b,
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18 |
SPL8 Acts Together with the Brassinosteroid-Signaling Component BIM1 in Controlling Arabidopsis thaliana Male Fertility
Xing S, Quodt V, Chandler J, Höhmann S, Berndtgen R, Huijser P Plants (Basel) (2013) 2:416-428
score: 24
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j,
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19 |
MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana
Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H BMC Genomics (2009) 10:643
score: 24
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR158a, ath-MIR158b, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR161, ath-MIR162a, ath-MIR162b, ath-MIR165a, ath-MIR165b, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR168a, ath-MIR168b, ath-MIR171a, ath-MIR171b, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR173, ath-MIR2933a, ath-MIR2933b, ath-MIR2934, ath-MIR2936, ath-MIR2937, ath-MIR2938, ath-MIR2939, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR390a, ath-MIR390b, ath-MIR396a, ath-MIR396b, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR402, ath-MIR403, ath-MIR773a, ath-MIR773b, ath-MIR774a, ath-MIR774b, ath-MIR778, ath-MIR827, ath-MIR829, ath-MIR845a, ath-MIR845b, ath-MIR854a, ath-MIR854b, ath-MIR854c, ath-MIR854d, ath-MIR854e, ath-MIR855, ath-MIR859,
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20 |
smRNAome profiling to identify conserved and novel microRNAs in Stevia rebaudiana Bertoni
Mandhan V, Kaur J, Singh K BMC Plant Biol (2012) 12:197
score: 21
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR165a, ath-MIR165b, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR2111a, ath-MIR2111b, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR394a, ath-MIR394b, ath-MIR396a, ath-MIR396b, ath-MIR403, ath-MIR408, ath-MIR414, ath-MIR856, ath-MIR858a, ath-MIR858b, osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR156k, osa-MIR156l, osa-MIR159a, osa-MIR159b, osa-MIR159c, osa-MIR159d, osa-MIR159e, osa-MIR159f, osa-MIR160a, osa-MIR160b, osa-MIR160c, osa-MIR160d, osa-MIR160e, osa-MIR160f, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR166j, osa-MIR166k, osa-MIR166l, osa-MIR166m, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR167j, osa-MIR169a, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR169r, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR172d, osa-MIR319a, osa-MIR319b, osa-MIR394, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR396d, osa-MIR396e, osa-MIR396f, osa-MIR396g, osa-MIR396h, osa-MIR408, osa-MIR414,
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Differential expression of miRNAs and their target genes in senescing leaves and siliques: insights from deep sequencing of small RNAs and cleaved target RNAs
Thatcher SR, Burd S, Wright C, Lers A, Green PJ Plant Cell Environ (2015) 38:188-200
score: 21
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR396a, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR408, ath-MIR447a, ath-MIR447b, ath-MIR447c, ath-MIR827,
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22 |
Antagonistic regulation of flowering time through distinct regulatory subunits of protein phosphatase 2A
Heidari B, Nemie-Feyissa D, Kangasjärvi S, Lillo C PLoS One (2013) 8:e67987
score: 21
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j,
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Cesium Toxicity Alters MicroRNA Processing and AGO1 Expressions in Arabidopsis thaliana
Jung IL, Ryu M, Cho SK, Shah P, Lee JH, Bae H, Kim IG, Yang SW PLoS One (2015) 10:e0125514
score: 21
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR158a, ath-MIR158b, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR162a, ath-MIR162b, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR165a, ath-MIR165b, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR168a, ath-MIR168b, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR170, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR173, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR390a, ath-MIR390b, ath-MIR393a, ath-MIR393b, ath-MIR394a, ath-MIR394b, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR396a, ath-MIR396b, ath-MIR397a, ath-MIR397b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR403,
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24 |
Identification of nitrogen starvation-responsive microRNAs in Arabidopsis thaliana
Liang G, He H, Yu D PLoS One (2012) 7:e48951
score: 20
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR158a, ath-MIR158b, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR1888a, ath-MIR1888b, ath-MIR2111a, ath-MIR2111b, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR393a, ath-MIR393b, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR397a, ath-MIR397b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR408, ath-MIR775, ath-MIR778, ath-MIR780, ath-MIR826a, ath-MIR826b, ath-MIR827, ath-MIR828, ath-MIR829, ath-MIR839, ath-MIR842, ath-MIR846, ath-MIR850, ath-MIR851, ath-MIR857, ath-MIR861, ath-MIR863,
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Identification and characterization of maize microRNAs involved in the very early stage of seed germination
Wang L, Liu H, Li D, Chen H BMC Genomics (2011) 12:154
score: 19
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR162a, ath-MIR162b, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR393a, ath-MIR393b, ath-MIR394a, ath-MIR394b, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR827, osa-MIR1432, osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR156k, osa-MIR156l, osa-MIR159a, osa-MIR159b, osa-MIR159c, osa-MIR159d, osa-MIR159e, osa-MIR159f, osa-MIR160a, osa-MIR160b, osa-MIR160c, osa-MIR160d, osa-MIR160e, osa-MIR160f, osa-MIR162a, osa-MIR162b, osa-MIR164a, osa-MIR164b, osa-MIR164c, osa-MIR164d, osa-MIR164e, osa-MIR164f, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR166j, osa-MIR166k, osa-MIR166l, osa-MIR166m, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR167j, osa-MIR169a, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR169r, osa-MIR171a, osa-MIR171b, osa-MIR171c, osa-MIR171d, osa-MIR171e, osa-MIR171f, osa-MIR171g, osa-MIR171h, osa-MIR171i, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR172d, osa-MIR2118a, osa-MIR2118b, osa-MIR2118c, osa-MIR2118d, osa-MIR2118e, osa-MIR2118f, osa-MIR2118g, osa-MIR2118h, osa-MIR2118i, osa-MIR2118j, osa-MIR2118k, osa-MIR2118l, osa-MIR2118m, osa-MIR2118n, osa-MIR2118o, osa-MIR2118p, osa-MIR2118q, osa-MIR2118r, osa-MIR2275a, osa-MIR2275b, osa-MIR2275c, osa-MIR2275d, osa-MIR393a, osa-MIR393b, osa-MIR394, osa-MIR395a, osa-MIR395b, osa-MIR395c, osa-MIR395d, osa-MIR395e, osa-MIR395f, osa-MIR395g, osa-MIR395h, osa-MIR395i, osa-MIR395j, osa-MIR395k, osa-MIR395l, osa-MIR395m, osa-MIR395n, osa-MIR395o, osa-MIR395p, osa-MIR395q, osa-MIR395r, osa-MIR395s, osa-MIR395t, osa-MIR395u, osa-MIR395v, osa-MIR395w, osa-MIR395x, osa-MIR395y, osa-MIR528, osa-MIR529a, osa-MIR529b, osa-MIR827, zma-MIR1432, zma-MIR156a, zma-MIR156b, zma-MIR156c, zma-MIR156d, zma-MIR156e, zma-MIR156f, zma-MIR156g, zma-MIR156h, zma-MIR156i, zma-MIR156j, zma-MIR156k, zma-MIR156l, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160a, zma-MIR160b, zma-MIR160c, zma-MIR160d, zma-MIR160e, zma-MIR160f, zma-MIR160g, zma-MIR162, zma-MIR164a, zma-MIR164b, zma-MIR164c, zma-MIR164d, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR166a, zma-MIR166b, zma-MIR166c, zma-MIR166d, zma-MIR166e, zma-MIR166f, zma-MIR166g, zma-MIR166h, zma-MIR166i, zma-MIR166j, zma-MIR166k, zma-MIR166l, zma-MIR166m, zma-MIR166n, zma-MIR167a, zma-MIR167b, zma-MIR167c, zma-MIR167d, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR167j, zma-MIR169a, zma-MIR169b, zma-MIR169c, zma-MIR169d, zma-MIR169e, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169j, zma-MIR169k, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR171a, zma-MIR171b, zma-MIR171c, zma-MIR171d, zma-MIR171e, zma-MIR171f, zma-MIR171g, zma-MIR171h, zma-MIR171i, zma-MIR171j, zma-MIR171k, zma-MIR171l, zma-MIR171m, zma-MIR171n, zma-MIR172a, zma-MIR172b, zma-MIR172c, zma-MIR172d, zma-MIR172e, zma-MIR2118a, zma-MIR2118b, zma-MIR2118c, zma-MIR2118d, zma-MIR2118e, zma-MIR2118f, zma-MIR2118g, zma-MIR2275a, zma-MIR2275b, zma-MIR2275c, zma-MIR2275d, zma-MIR393a, zma-MIR393b, zma-MIR393c, zma-MIR394a, zma-MIR394b, zma-MIR395a, zma-MIR395b, zma-MIR395c, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, zma-MIR482, zma-MIR528a, zma-MIR528b, zma-MIR529, zma-MIR827,
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Expression dynamics of miRNAs and their targets in seed germination conditions reveals miRNA-ta-siRNA crosstalk as regulator of seed germination
Sarkar Das S, Yadav S, Singh A, Gautam V, Sarkar AK, Nandi AK, Karmakar P, Majee M, Sanan-Mishra N Sci Rep (2018) 8:1233
score: 18
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR161, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR165a, ath-MIR165b, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR2112, ath-MIR390a, ath-MIR390b, ath-MIR395a, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR402, ath-MIR417, ath-MIR447a, ath-MIR824, ath-MIR834, ath-MIR854a, ath-MIR854b, ath-MIR854c, ath-MIR854d, ath-MIR854e,
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TCP4-dependent induction of CONSTANS transcription requires GIGANTEA in photoperiodic flowering in Arabidopsis
Kubota A, Ito S, Shim JS, Johnson RS, Song YH, Breton G, Goralogia GS, Kwon MS, Laboy Cintrón D, Koyama T, Ohme-Takagi M, Pruneda-Paz JL, Kay SA, MacCoss MJ, Imaizumi T PLoS Genet (2017) 13:e1006856
score: 16
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR319a, ath-MIR319b, ath-MIR319c,
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Paralogous SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) genes differentially regulate leaf initiation and reproductive phase change in petunia
Preston JC, Jorgensen SA, Orozco R, Hileman LC Planta (2016) 243:429-440
score: 16
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j,
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29 |
Biosynthesis and metabolic engineering of anthocyanins in Arabidopsis thaliana
Shi MZ, Xie DY Recent Pat Biotechnol (2014) 8:47-60
score: 13
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR828,
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MicroRNA-mediated repression of the seed maturation program during vegetative development in Arabidopsis
Tang X, Bian S, Tang M, Lu Q, Li S, Liu X, Tian G, Nguyen V, Tsang EW, Wang A, Rothstein SJ, Chen X, Cui Y PLoS Genet (2012) 8:e1003091
score: 12
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR165a, ath-MIR165b, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g,
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31 |
Uncovering miRNAs involved in crosstalk between nutrient deficiencies in Arabidopsis
Liang G, Ai Q, Yu D Sci Rep (2015) 5:11813
score: 10
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157d, ath-MIR158a, ath-MIR158b, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR161, ath-MIR162a, ath-MIR162b, ath-MIR163, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR165a, ath-MIR165b, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR170, ath-MIR171b, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR173, ath-MIR2111a, ath-MIR2111b, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR391, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR397a, ath-MIR397b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR400, ath-MIR408, ath-MIR447a, ath-MIR447b, ath-MIR447c, ath-MIR773a, ath-MIR773b, ath-MIR775, ath-MIR822, ath-MIR823, ath-MIR824, ath-MIR826a, ath-MIR826b, ath-MIR827, ath-MIR829, ath-MIR833a, ath-MIR833b, ath-MIR837, ath-MIR841a, ath-MIR841b, ath-MIR842, ath-MIR843, ath-MIR845a, ath-MIR848, ath-MIR852, ath-MIR854a, ath-MIR854b, ath-MIR854c, ath-MIR854d, ath-MIR854e, ath-MIR857, ath-MIR864,
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The suppression of WRKY44 by GIGANTEA-miR172 pathway is involved in drought response of Arabidopsis thaliana
Han Y, Zhang X, Wang W, Wang Y, Ming F PLoS One (2013) 8:e73541
score: 10
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e,
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Over-Expression of GmGIa-Regulated Soybean miR172a Confers Early Flowering in Transgenic Arabidopsis thaliana
Wang T, Sun MY, Wang XS, Li WB, Li YG Int J Mol Sci (2016) 17
score: 9
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR390a, ath-MIR390b, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, gma-MIR156a, gma-MIR156aa, gma-MIR156ab, gma-MIR156b, gma-MIR156c, gma-MIR156d, gma-MIR156e, gma-MIR156f, gma-MIR156g, gma-MIR156h, gma-MIR156i, gma-MIR156j, gma-MIR156k, gma-MIR156l, gma-MIR156m, gma-MIR156n, gma-MIR156o, gma-MIR156p, gma-MIR156q, gma-MIR156r, gma-MIR156s, gma-MIR156t, gma-MIR156u, gma-MIR156v, gma-MIR156w, gma-MIR156x, gma-MIR156y, gma-MIR156z, gma-MIR159a, gma-MIR159b, gma-MIR159c, gma-MIR159d, gma-MIR159e, gma-MIR159f, gma-MIR172a, gma-MIR172b, gma-MIR172c, gma-MIR172d, gma-MIR172e, gma-MIR172f, gma-MIR172g, gma-MIR172h, gma-MIR172i, gma-MIR172j, gma-MIR172k, gma-MIR172l, gma-MIR319a, gma-MIR319b, gma-MIR319c, gma-MIR319d, gma-MIR319e, gma-MIR319f, gma-MIR319g, gma-MIR319h, gma-MIR319i, gma-MIR319j, gma-MIR319k, gma-MIR319l, gma-MIR319m, gma-MIR319n, gma-MIR319o, gma-MIR319p, gma-MIR319q, gma-MIR390a, gma-MIR390b, gma-MIR390c, gma-MIR390d, gma-MIR390e, gma-MIR390f, gma-MIR390g, gma-MIR399a, gma-MIR399b, gma-MIR399c, gma-MIR399d, gma-MIR399e, gma-MIR399f, gma-MIR399g, gma-MIR399h, gma-MIR399i, gma-MIR399j, gma-MIR399k, gma-MIR399l, gma-MIR399m, gma-MIR399n, gma-MIR399o,
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An organ boundary-enriched gene regulatory network uncovers regulatory hierarchies underlying axillary meristem initiation
Tian C, Zhang X, He J, Yu H, Wang Y, Shi B, Han Y, Wang G, Feng X, Zhang C, Wang J, Qi J, Yu R, Jiao Y Mol Syst Biol (2014) 10:755
score: 8
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR164a, ath-MIR164b, ath-MIR164c,
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An artificial miRNA system reveals that relative contribution of translational inhibition to miRNA-mediated regulation depends on environmental and developmental factors in Arabidopsis thaliana
von Born P, Bernardo-Faura M, Rubio-Somoza I PLoS One (2018) 13:e0192984
score: 8
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e,
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Creating Completely Both Male and Female Sterile Plants by Specifically Ablating Microspore and Megaspore Mother Cells
Huang J, Smith AR, Zhang T, Zhao D Front Plant Sci (2016) 7:30
score: 8
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR160a, nta-MIR156a, nta-MIR156b, nta-MIR156c, nta-MIR156d, nta-MIR156e, nta-MIR156f, nta-MIR156g, nta-MIR156h, nta-MIR156i, nta-MIR156j, nta-MIR160a,
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The Arabidopsis CURVY1 (CVY1) gene encoding a novel receptor-like protein kinase regulates cell morphogenesis, flowering time and seed production
Gachomo EW, Jno Baptiste L, Kefela T, Saidel WM, Kotchoni SO BMC Plant Biol (2014) 14:221
score: 7
Other hairpins from this paper: ath-MIR156a,
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Fruit shape diversity in the Brassicaceae is generated by varying patterns of anisotropy
Eldridge T, Åangowski Å, Stacey N, Jantzen F, Moubayidin L, Sicard A, Southam P, Kennaway R, Lenhard M, Coen ES, Østergaard L Development (2016) 143:3394-3406
score: 7
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j,
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Thermopriming triggers splicing memory in Arabidopsis
Ling Y, Serrano N, Gao G, Atia M, Mokhtar M, Woo YH, Bazin J, Veluchamy A, Benhamed M, Crespi M, Gehring C, Reddy ASN, Mahfouz MM J Exp Bot (2018) 69:2659-2675
score: 6
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR400,
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40 |
Global small RNA analysis in fast-growing Arabidopsis thaliana with elevated concentrations of ATP and sugars
Liang C, Liu X, Sun Y, Yiu SM, Lim BL BMC Genomics (2014) 15:116
score: 6
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR158b, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR173, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR390a, ath-MIR390b, ath-MIR391, ath-MIR393a, ath-MIR393b, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR396a, ath-MIR396b, ath-MIR397a, ath-MIR397b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR399a, ath-MIR399b, ath-MIR399c, ath-MIR399d, ath-MIR399e, ath-MIR399f, ath-MIR408, ath-MIR780, ath-MIR825, ath-MIR828, ath-MIR836, ath-MIR841a, ath-MIR841b, ath-MIR846,
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41 |
Identification of novel miRNAs and miRNA dependent developmental shifts of gene expression in Arabidopsis thaliana
Zhan S, Lukens L PLoS One (2010) 5:e10157
score: 6
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR163, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e,
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Computational prediction of miRNAs and their targets in Phaseolus vulgaris using simple sequence repeat signatures
Nithin C, Patwa N, Thomas A, Bahadur RP, Basak J BMC Plant Biol (2015) 15:140
score: 6
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR169a, ath-MIR169b, ath-MIR169c, ath-MIR169d, ath-MIR169e, ath-MIR169f, ath-MIR169g, ath-MIR169h, ath-MIR169i, ath-MIR169j, ath-MIR169k, ath-MIR169l, ath-MIR169m, ath-MIR169n, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR396a, ath-MIR396b, ath-MIR399a, ath-MIR408, ath-MIR5021, ath-MIR848, gma-MIR1527, gma-MIR1533, gma-MIR156a, gma-MIR156aa, gma-MIR156ab, gma-MIR156b, gma-MIR156c, gma-MIR156d, gma-MIR156e, gma-MIR156f, gma-MIR156g, gma-MIR156h, gma-MIR156i, gma-MIR156j, gma-MIR156k, gma-MIR156l, gma-MIR156m, gma-MIR156n, gma-MIR156o, gma-MIR156p, gma-MIR156q, gma-MIR156r, gma-MIR156s, gma-MIR156t, gma-MIR156u, gma-MIR156v, gma-MIR156w, gma-MIR156x, gma-MIR156y, gma-MIR156z, gma-MIR166a, gma-MIR166b, gma-MIR166c, gma-MIR166d, gma-MIR166e, gma-MIR166f, gma-MIR166g, gma-MIR166h, gma-MIR166i, gma-MIR166j, gma-MIR166k, gma-MIR166l, gma-MIR166m, gma-MIR166n, gma-MIR166o, gma-MIR166p, gma-MIR166q, gma-MIR166r, gma-MIR166s, gma-MIR166t, gma-MIR166u, gma-MIR169a, gma-MIR169b, gma-MIR169c, gma-MIR169d, gma-MIR169e, gma-MIR169f, gma-MIR169g, gma-MIR169h, gma-MIR169i, gma-MIR169j, gma-MIR169k, gma-MIR169l, gma-MIR169m, gma-MIR169n, gma-MIR169o, gma-MIR169p, gma-MIR169r, gma-MIR169s, gma-MIR169t, gma-MIR169u, gma-MIR169v, gma-MIR169w, gma-MIR171a, gma-MIR171b, gma-MIR171c, gma-MIR171d, gma-MIR171e, gma-MIR171f, gma-MIR171g, gma-MIR171h, gma-MIR171i, gma-MIR171j, gma-MIR171k, gma-MIR171l, gma-MIR171m, gma-MIR171n, gma-MIR171o, gma-MIR171p, gma-MIR171q, gma-MIR171r, gma-MIR171s, gma-MIR171t, gma-MIR171u, gma-MIR395a, gma-MIR395b, gma-MIR395c, gma-MIR395d, gma-MIR395e, gma-MIR395f, gma-MIR395g, gma-MIR395h, gma-MIR395i, gma-MIR395j, gma-MIR395k, gma-MIR395l, gma-MIR395m, gma-MIR396a, gma-MIR396b, gma-MIR396c, gma-MIR396d, gma-MIR396e, gma-MIR396f, gma-MIR396g, gma-MIR396h, gma-MIR396i, gma-MIR396j, gma-MIR396k, gma-MIR399a, gma-MIR408a, gma-MIR408b, gma-MIR408c, gma-MIR408d, pvu-MIR166a, pvu-MIR399a,
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De novo computational identification of stress-related sequence motifs and microRNA target sites in untranslated regions of a plant translatome
Munusamy P, Zolotarov Y, Meteignier LV, Moffett P, Strömvik MV Sci Rep (2017) 7:43861
score: 5
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR157a, ath-MIR157b, ath-MIR157c, ath-MIR157d, ath-MIR5021,
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Differential mRNA Accumulation upon Early Arabidopsis thaliana Infection with ORMV and TMV-Cg Is Associated with Distinct Endogenous Small RNAs Level
Zavallo D, Debat HJ, Conti G, Manacorda CA, Rodriguez MC, Asurmendi S PLoS One (2015) 10:e0134719
score: 5
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR161, ath-MIR162a, ath-MIR162b, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR165a, ath-MIR165b, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR168a, ath-MIR168b, ath-MIR171a, ath-MIR171b, ath-MIR171c, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR390a, ath-MIR390b, ath-MIR394a, ath-MIR394b, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR396a, ath-MIR396b, ath-MIR398a, ath-MIR398b, ath-MIR398c, ath-MIR403, ath-MIR408, ath-MIR472, ath-MIR841a, ath-MIR841b,
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POWERDRESS and diversified expression of the MIR172 gene family bolster the floral stem cell network
Yumul RE, Kim YJ, Liu X, Wang R, Ding J, Xiao L, Chen X PLoS Genet (2013) 9:e1003218
score: 5
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR159a, ath-MIR159b, ath-MIR159c, ath-MIR166a, ath-MIR166b, ath-MIR166c, ath-MIR166d, ath-MIR166e, ath-MIR166f, ath-MIR166g, ath-MIR167a, ath-MIR167b, ath-MIR167c, ath-MIR167d, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ath-MIR173, ath-MIR319a, ath-MIR319b, ath-MIR319c, ath-MIR390a, ath-MIR390b,
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Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function
Zhang X, Xia J, Lii YE, Barrera-Figueroa BE, Zhou X, Gao S, Lu L, Niu D, Chen Z, Leung C, Wong T, Zhang H, Guo J, Li Y, Liu R, Liang W, Zhu JK, Zhang W, Jin H Genome Biol (2012) 13:R20
score: 5
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR319a, ath-MIR319b, ath-MIR319c, osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR156k, osa-MIR156l, osa-MIR319a, osa-MIR319b,
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Viral RNase3 Co-Localizes and Interacts with the Antiviral Defense Protein SGS3 in Plant Cells
Weinheimer I, Haikonen T, Ala-Poikela M, Moser M, Streng J, Rajamäki ML, Valkonen JP PLoS One (2016) 11:e0159080
score: 5
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR390a, ath-MIR390b,
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Was low CO2 a driving force of C4 evolution: Arabidopsis responses to long-term low CO2 stress
Li Y, Xu J, Haq NU, Zhang H, Zhu XG J Exp Bot (2014) 65:3657-3667
score: 5
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j,
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49 |
Epigenetic regulation of bud dormancy events in perennial plants
RÃos G, Leida C, Conejero A, Badenes ML Front Plant Sci (2014) 5:247
score: 4
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR172a, ath-MIR172b, ath-MIR172c, ath-MIR172d, ath-MIR172e, ppe-MIR156a, ppe-MIR156b, ppe-MIR156c, ppe-MIR156d, ppe-MIR156e, ppe-MIR156f, ppe-MIR156g, ppe-MIR156h, ppe-MIR156i, ppe-MIR172a, ppe-MIR172b, ppe-MIR172c, ppe-MIR172d,
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Analyses of RNA-Seq and sRNA-Seq data reveal a complex network of anti-viral defense in TCV-infected Arabidopsis thaliana
Wu C, Li X, Guo S, Wong SM Sci Rep (2016) 6:36007
score: 4
Other hairpins from this paper: ath-MIR156a, ath-MIR156b, ath-MIR156c, ath-MIR156d, ath-MIR156e, ath-MIR156f, ath-MIR156g, ath-MIR156h, ath-MIR156i, ath-MIR156j, ath-MIR158a, ath-MIR158b, ath-MIR160a, ath-MIR160b, ath-MIR160c, ath-MIR164a, ath-MIR164b, ath-MIR164c, ath-MIR165a, ath-MIR165b, ath-MIR168a, ath-MIR168b, ath-MIR170, ath-MIR393a, ath-MIR393b, ath-MIR395a, ath-MIR395b, ath-MIR395c, ath-MIR395d, ath-MIR395e, ath-MIR395f, ath-MIR400, ath-MIR408, ath-MIR5654, ath-MIR775, ath-MIR829, ath-MIR838, ath-MIR850, ath-MIR852,
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