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1 publications mentioning gma-MIR1522

Open access articles that are associated with the species Glycine max and mention the gene name MIR1522. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 21
Other miRNAs from this paper: gma-MIR156d, gma-MIR156e, gma-MIR156c, gma-MIR160a, gma-MIR166a, gma-MIR166b, gma-MIR156a, gma-MIR396b, gma-MIR156b, gma-MIR390a, gma-MIR390b, gma-MIR393a, gma-MIR482a, gma-MIR1508a, gma-MIR1510a, gma-MIR1512a, gma-MIR1514a, gma-MIR1514b, gma-MIR1515a, gma-MIR1530, gma-MIR1508b, gma-MIR1510b, gma-MIR2108b, gma-MIR1520j, gma-MIR482b, gma-MIR4388, gma-MIR156f, gma-MIR1520p, gma-MIR156g, gma-MIR394a, gma-MIR156h, gma-MIR156i, gma-MIR160b, gma-MIR160c, gma-MIR160d, gma-MIR160e, gma-MIR166c, gma-MIR166d, gma-MIR166e, gma-MIR166f, gma-MIR166g, gma-MIR166h, gma-MIR390c, gma-MIR2118a, gma-MIR2118b, gma-MIR482c, gma-MIR1508c, gma-MIR4992, gma-MIR5041, gma-MIR395b, gma-MIR156j, gma-MIR156k, gma-MIR156l, gma-MIR156m, gma-MIR156n, gma-MIR156o, gma-MIR166i, gma-MIR166j, gma-MIR482d, gma-MIR1512b, gma-MIR1512c, gma-MIR5769, gma-MIR393b, gma-MIR399a, gma-MIR828a, gma-MIR156p, gma-MIR828b, gma-MIR156q, gma-MIR156r, gma-MIR399b, gma-MIR156s, gma-MIR166k, gma-MIR156t, gma-MIR482e, gma-MIR399c, gma-MIR399d, gma-MIR399e, gma-MIR166l, gma-MIR399f, gma-MIR399g, gma-MIR166m, gma-MIR399h, gma-MIR156u, gma-MIR156v, gma-MIR156w, gma-MIR156x, gma-MIR156y, gma-MIR156z, gma-MIR156aa, gma-MIR156ab, gma-MIR160f, gma-MIR166n, gma-MIR166o, gma-MIR166p, gma-MIR166q, gma-MIR166r, gma-MIR166s, gma-MIR166t, gma-MIR166u, gma-MIR390d, gma-MIR390e, gma-MIR390f, gma-MIR390g, gma-MIR393c, gma-MIR393d, gma-MIR393e, gma-MIR393f, gma-MIR393g, gma-MIR393h, gma-MIR393i, gma-MIR393j, gma-MIR393k, gma-MIR1515b, gma-MIR399i, gma-MIR399j, gma-MIR399k, gma-MIR399l, gma-MIR399m, gma-MIR399n, gma-MIR399o
For instance, we identified 22 expressed eTMs for gma-miR1522, which was predicted to target a gene encoding ABC transporter (Glyma03g29150, homolog of At3g21090 that is required for lipid transport; Pighin et al., 2004; Table S5). [score:5]
Additionally, 65 of the 119 expressed eTMs for miRNAs predicted to target genes involved in lipid metabolism had a homolog in at least one of the other four species used in this study (Table S7; eTMs for miR1522 as an example was shown in Figure 1C). [score:5]
Sequences containing a well conserved target mimic site for gma-miR1522 were also found in the four additional species (R. communis, L. usitatissimum, B. rapa, and G. raimondii) examined in this study. [score:3]
A number of eTMs were predicted for gma-miR1522 and 22 of them were expressed in at least one of the tissues or organs examined in this study (Tables S1, S2). [score:3]
Figure 1 Endogenous target mimics (eTMs) for gma-miR1522 in soybean. [score:3]
As an example, sequence alignment between the soybean-specific gma-miR1522 and one of its eTMs, gma-eTM1522-2, was shown in Figure 1A, which showed a typical pairing pattern between a miRNA and its eTM, i. e., three unmatched nucleotides in the eTM at the region corresponding to the 10th to 12th positions from the 5′ end of gma-miR1522 (Figure 1A). [score:1]
Prediction of conserved eTMs for gma-miR1522 in all four species examined in this study suggests that miR1522 could be present, although it has not been reported, in these species. [score:1]
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