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Brachypodium distachyon miRNAs (135 sequences)
ID
Accession
RPM
Chromosome
Start
End
Strand
Fetch
bdi-MIR156a
MI0011566
-
chr4
39473438
39473584
+
bdi-MIR156b
MI0018104
-
chr3
39258110
39258314
-
bdi-MIR156c
MI0018109
-
chr3
4336022
4336167
-
bdi-MIR156d
MI0018122
-
chr5
18202182
18202332
-
bdi-MIR159
MI0018117
-
chr2
5602219
5602452
+
bdi-MIR160a
MI0018086
-
chr1
4550703
4550877
-
bdi-MIR160b
MI0018093
-
chr1
28020411
28020556
-
bdi-MIR160c
MI0018100
-
chr3
3414575
3414722
-
bdi-MIR160d
MI0018106
-
chr3
12734293
12734442
+
bdi-MIR160e
MI0018107
-
chr3
41554285
41554428
+
bdi-MIR162
MI0018213
-
chr3
49592002
49592134
+
bdi-MIR164a
MI0018118
-
chr2
19949322
19949514
-
bdi-MIR164b
MI0018094
-
chr1
14544140
14544348
+
bdi-MIR164c
MI0018152
-
chr3
59107074
59107211
-
bdi-MIR164e
MI0018215
-
chr2
26808982
26809108
-
bdi-MIR164f
MI0018216
-
chr2
19949341
19949501
+
bdi-MIR166a
MI0011570
-
chr1
6574374
6574493
+
bdi-MIR166b
MI0018092
-
chr1
30655617
30655860
-
bdi-MIR166c
MI0018113
-
chr3
33098767
33098938
+
bdi-MIR166d
MI0018089
-
chr1
71419377
71419541
-
bdi-MIR166e
MI0018112
-
chr3
51437868
51438018
+
bdi-MIR166f
MI0018083
-
chr4
6090867
6091011
-
bdi-MIR166g
MI0018135
-
chr4
37627843
37628050
+
bdi-MIR167a
MI0011561
-
chr1
6349045
6349135
+
bdi-MIR167b
MI0018091
-
chr1
3770002
3770191
+
bdi-MIR167c
MI0018095
-
chr1
54067075
54067233
+
bdi-MIR167d
MI0018102
-
chr3
3632405
3632608
-
bdi-MIR168
MI0018098
-
chr3
1774700
1774835
-
bdi-MIR169a
MI0018120
-
chr2
7704123
7704303
+
bdi-MIR169b
MI0011574
-
chr1
27159120
27159225
-
bdi-MIR169c
MI0018126
-
chr5
23763870
23764020
-
bdi-MIR169d
MI0018079
-
chr4
26242409
26242595
+
bdi-MIR169e
MI0018114
-
chr3
43441526
43441689
+
bdi-MIR169f
MI0018160
-
chr3
16738806
16738956
+
bdi-MIR169g
MI0018105
-
chr3
43444486
43444666
+
bdi-MIR169h
MI0018124
-
chr5
11563834
11563997
-
bdi-MIR169i
MI0018080
-
chr4
44509037
44509211
+
bdi-MIR169j
MI0018082
-
chr4
44513754
44513936
+
bdi-MIR169k
MI0018097
-
chr1
1175425
1175598
+
bdi-MIR171a
MI0011559
-
chr3
52059037
52059156
-
bdi-MIR171b
MI0018084
-
chr1
6911133
6911296
+
bdi-MIR171c
MI0011571
-
chr5
24711141
24711226
-
bdi-MIR171d
MI0018090
-
chr1
72765307
72765462
-
bdi-MIR172a
MI0018110
-
chr3
55737301
55737453
-
bdi-MIR172b
MI0018121
-
chr2
58915755
58916008
-
bdi-MIR172d
MI0011567
-
chr2
38183339
38183431
-
bdi-MIR319a
MI0018137
-
chr4
31253293
31253572
+
bdi-MIR319b
MI0018236
-
chr2
45992390
45992579
-
bdi-MIR390a
MI0018085
-
chr1
2722067
2722275
+
bdi-MIR393a
MI0018119
-
chr2
2001005
2001163
-
bdi-MIR393b
MI0018123
-
chr5
27613816
27613989
+
bdi-MIR394
MI0018115
-
chr3
52316372
52316571
-
bdi-MIR395a
MI0018081
-
chr4
16374432
16374612
+
bdi-MIR395b
MI0018088
-
chr1
55440558
55440795
-
bdi-MIR395c
MI0018127
-
chr5
25455997
25456122
+
bdi-MIR395d
MI0018147
-
chr3
14764296
14764443
-
bdi-MIR395e
MI0018220
-
chr5
25455195
25455344
+
bdi-MIR395f
MI0018221
-
chr5
25455426
25455521
+
bdi-MIR395g
MI0018222
-
chr5
25455723
25455811
+
bdi-MIR395h
MI0018223
-
chr5
25455882
25455957
+
bdi-MIR395j
MI0018224
-
chr5
25456151
25456238
+
bdi-MIR395k
MI0018225
-
chr5
25456290
25456375
+
bdi-MIR395l
MI0018226
-
chr5
25456562
25456657
+
bdi-MIR395m
MI0018219
-
chr1
55440156
55440250
-
bdi-MIR395n
MI0018227
-
chr5
25457116
25457205
+
bdi-MIR396a
MI0018111
-
chr3
59349783
59349991
-
bdi-MIR396b
MI0018125
-
chr5
27112463
27112651
+
bdi-MIR396c
MI0018101
-
chr3
54968138
54968290
-
bdi-MIR396d
MI0018096
-
chr1
46677004
46677155
-
bdi-MIR396e
MI0018108
-
chr3
54962836
54963036
+
bdi-MIR397a
MI0011565
-
chr3
3149697
3149820
-
bdi-MIR398a
MI0018116
-
chr2
35924413
35924562
-
bdi-MIR398b
MI0018150
-
chr3
21918225
21918387
+
bdi-MIR399a
MI0011572
-
chr1
34375795
34375894
-
bdi-MIR399b
MI0018103
-
chr3
7135266
7135425
+
bdi-MIR408
MI0017941
-
chr2
10450366
10450510
+
bdi-MIR437
MI0011573
-
chr1
67022612
67022752
-
bdi-MIR444
MI0011558
-
bdi-MIR528
MI0018087
-
chr1
73059536
73059695
-
bdi-MIR529
MI0018229
-
chr3
44898509
44898615
+
bdi-MIR827
MI0018128
-
chr5
18037481
18037644
-
bdi-MIR1122
MI0011568
-
chr5
25218612
25218791
-
bdi-MIR1127
MI0011575
-
chr1
58113848
58113964
+
bdi-MIR1135
MI0011576
-
chr2
24701180
24701317
+
bdi-MIR1139
MI0011562
-
chr3
53829174
53829293
+
bdi-MIR1878
MI0017956
-
chr4
37301958
37302055
+
bdi-MIR5054
MI0018238
-
chr3
21161853
21161949
+
bdi-MIR5055
MI0017944
-
chr3
13969508
13969748
+
bdi-MIR5056
MI0017945
-
chr2
20794717
20794860
+
bdi-MIR5057
MI0017947
-
chr4
10594352
10594427
+
bdi-MIR5058
MI0017948
-
chr4
31543610
31543707
+
bdi-MIR5059
MI0017951
-
chr1
55078377
55078452
+
bdi-MIR5060
MI0017953
-
chr5
10072906
10073211
-
bdi-MIR5061
MI0017954
-
chr1
61734973
61735092
+
bdi-MIR5062a
MI0017959
-
chr1
24013988
24014136
-
bdi-MIR5063
MI0017961
-
chr1
34157655
34157732
-
bdi-MIR5064
MI0017962
-
chr2
38751727
38752100
+
bdi-MIR5065
MI0017963
-
chr3
59067940
59068130
-
bdi-MIR5066
MI0017964
-
chr1
55649102
55649202
-
bdi-MIR5067
MI0017967
-
chr1
20615436
20615521
+
bdi-MIR5068
MI0017968
-
chr3
25092263
25092338
+
bdi-MIR5069
MI0017971
-
chr4
5340628
5340708
-
bdi-MIR5070
MI0017975
-
chr2
35045123
35045246
+
bdi-MIR5163
MI0018129
-
chr4
11947824
11948009
-
bdi-MIR5164
MI0018131
-
chr4
22543862
22544027
-
bdi-MIR5165
MI0018132
-
chr4
33186148
33186396
-
bdi-MIR5166
MI0018133
-
chr4
14440355
14440694
+
bdi-MIR5167
MI0018134
-
chr4
42126781
42127074
-
bdi-MIR5169
MI0018136
-
chr4
42248170
42248379
-
bdi-MIR5170
MI0018139
-
chr1
56853936
56854310
-
bdi-MIR5171
MI0018140
-
chr1
46051254
46051407
-
bdi-MIR5172
MI0018141
-
chr1
44311568
44311956
+
bdi-MIR5173
MI0018142
-
chr1
22135899
22136079
-
bdi-MIR5174
MI0018143
-
chr1
45787966
45788131
-
bdi-MIR5175a
MI0018144
-
chr1
15325058
15325194
+
bdi-MIR5175b
MI0018146
-
chr3
19465406
19465546
+
bdi-MIR5176
MI0018145
-
chr1
28306160
28306307
-
bdi-MIR5177
MI0018148
-
chr3
9879796
9880206
+
bdi-MIR5178
MI0018149
-
chr3
8463664
8463877
-
bdi-MIR5179
MI0018151
-
chr3
9493263
9493513
-
bdi-MIR5180a
MI0018153
-
chr3
56704432
56704571
+
bdi-MIR5180b
MI0018138
-
chr4
5647864
5647998
-
bdi-MIR5181a
MI0018154
-
chr2
48358975
48359115
+
bdi-MIR5181b
MI0018130
-
chr4
7045106
7045256
+
bdi-MIR5182
MI0018155
-
chr2
51090546
51090760
-
bdi-MIR5183
MI0018156
-
chr2
46665653
46665804
-
bdi-MIR5184
MI0018157
-
chr2
47213136
47213398
-
bdi-MIR5185a
MI0018158
-
chr2
41735710
41735862
+
bdi-MIR5185b
MI0018159
-
chr5
6094953
6095105
+
bdi-MIR5198
MI0018230
-
chr1
3141686
3141778
+
bdi-MIR5199
MI0018231
-
chr1
42791417
42791560
-
bdi-MIR5200
MI0018232
-
chr1
47483433
47483519
-
bdi-MIR5201
MI0018233
-
chr2
42461428
42461517
-
bdi-MIR5202
MI0018234
-
chr1
28904144
28904243
-
bdi-MIR5203
MI0018235
-
chr3
14779421
14779487
-
Get selected sequences:
Stem-loop sequence
Mature sequence
Select sequences and output type, then click "Fetch Sequences":
Unaligned fasta format
ClustalW alignment