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miRNA gene family: mir-1 (116 sequences)
ID
Accession
RPM
Chromosome
Start
End
Strand
Fetch
aae-mir-1
MI0013455
-
supercont1.812
291326
291401
+
aca-mir-1a-1
MI0018799
-
4
38859440
38859535
+
aca-mir-1a-2
MI0018800
-
4
151823196
151823285
+
aca-mir-1b
MI0018801
-
GL343308.1
91113
91211
+
aca-mir-206
MI0018810
-
1
122853025
122853117
+
aga-mir-1
MI0001601
-
3R
10569154
10569251
-
ame-mir-1-1
MI0001575
8.36e+04
Group16.18
5854
5936
+
ame-mir-1-2
MI0015955
4.67e+03
GroupUn.3013
14765
14847
-
api-mir-1
MI0013909
-
GL350503.1
79303
79384
+
asu-mir-1
MI0018528
-
bfl-mir-1
MI0010008
7.55e+03
Bf_V2_185
1444175
1444270
+
bmo-mir-1a
MI0004969
1.68e+05
nscaf2589
5616175
5616259
-
bmo-mir-1b
MI0012994
31.3
nscaf2589
5616178
5616256
+
bta-mir-1-1
MI0009719
-
chr13
55237544
55237619
-
bta-mir-1-2
MI0009718
-
chr24
34841096
34841180
+
bta-mir-206
MI0009772
-
chr23
24308042
24308127
+
cbr-mir-1
MI0000493
880
chrI
7435815
7435908
-
ccr-mir-1
MI0023302
-
ccr-mir-206
MI0023366
-
cel-mir-1
MI0000003
1.28e+04
I
6172664
6172759
-
cfa-mir-1-1
MI0008060
-
chr24
49527546
49527604
+
cfa-mir-1-2
MI0008118
-
chr7
69255536
69255594
+
cfa-mir-206
MI0008002
-
chr12
22807563
22807622
+
cgr-mir-1
MI0020375
-
cgr-mir-206
MI0020456
-
cin-mir-1
MI0015480
-
1q
5268751
5268845
-
cqu-mir-1
MI0013566
6.72e+04
supercont3.78
246202
246278
+
crm-mir-1
MI0011077
1.04e+03
Crem_Contig9
244578
244673
+
cte-mir-1
MI0010046
4.29e+03
scaffold_274
105938
106031
-
dan-mir-1
MI0008968
-
scaffold_12916
6985825
6985912
+
der-mir-1
MI0009075
-
scaffold_4845
3954276
3954363
-
dgr-mir-1
MI0009155
-
scaffold_15126
6250416
6250502
+
dme-mir-1
MI0000116
4.04e+04
2L
20487441
20487531
+
dmo-mir-1
MI0009248
-
scaffold_6500
24555186
24555275
+
dpe-mir-1
MI0009278
-
scaffold_1
9292023
9292109
-
dps-mir-1
MI0001289
-
4_group3
7845323
7845410
-
dpu-mir-1
MI0012216
-
scaffold_1
1720868
1720961
-
dre-mir-1-1
MI0001878
-
23
7137155
7137260
+
dre-mir-1-2
MI0001877
-
Zv9_scaffold3540
266415
266501
+
dre-mir-206-1
MI0002045
-
20
19616808
19616906
-
dre-mir-206-2
MI0002046
-
17
5730402
5730510
-
dse-mir-1
MI0009376
-
scaffold_18
365668
365755
+
dsi-mir-1
MI0009432
-
2L
20052711
20052798
+
dvi-mir-1
MI0009527
-
scaffold_12963
13613429
13613515
-
dwi-mir-1
MI0009555
-
scf2_1100000004521
1845941
1846026
+
dya-mir-1
MI0009655
-
2R
6842726
6842814
+
eca-mir-1-1
MI0012746
-
8
39912211
39912288
+
eca-mir-1-2
MI0012853
-
22
48433506
48433581
+
eca-mir-206-2
MI0012845
-
20
49820595
49820663
+
egr-mir-1
MI0017775
-
contig_32174
1131651
1131717
-
emu-mir-1
MI0017798
-
scaffold_007760
1198289
1198355
+
fru-mir-1
MI0003423
-
HE602556.1
1379732
1379807
-
gga-mir-1a-1
MI0001247
-
chr20
8472265
8472335
+
gga-mir-1a-2
MI0001196
-
chr2
102179979
102180063
-
gga-mir-1b
MI0001254
-
chr23
4294312
4294375
+
gga-mir-206
MI0001207
-
chr3
107213960
107214035
-
ggo-mir-1
MI0020625
-
18
18774034
18774144
-
ggo-mir-206
MI0020728
-
6
6
53560042
53590754
53560153
53590865
-
+
hco-mir-1
MI0020072
-
hme-mir-1a
MI0021741
-
HE672073
1166261
1166350
-
hme-mir-1b
MI0021740
-
HE672073
1166256
1166357
+
hsa-mir-1-1
MI0000651
2.09e+03
chr20
61151513
61151583
+
hsa-mir-1-2
MI0000437
2e+03
chr18
19408965
19409049
-
hsa-mir-206
MI0000490
286
chr6
52009147
52009232
+
isc-mir-1
MI0012261
-
DS811420
416289
416380
+
lgi-mir-1
MI0010100
-
sca_1
5198452
5198543
-
mdo-mir-1
MI0005269
-
chr3
263364374
263364459
+
mdo-mir-206
MI0005317
-
chr2
300498999
300499074
+
mml-mir-1-1
MI0007568
-
10
1973274
1973350
-
mml-mir-1-2
MI0007569
-
18
14835315
14835386
-
mml-mir-206
MI0007667
-
4
51799701
51799786
+
mmu-mir-1a-1
MI0000139
2.2e+04
chr2
180389048
180389124
+
mmu-mir-1a-2
MI0000652
2.19e+04
chr18
10785481
10785552
-
mmu-mir-1b
MI0006283
3.16
chr18
10785446
10785567
+
mmu-mir-206
MI0000249
5.19e+03
chr1
20679010
20679082
+
mne-mir-206
MI0002620
-
mse-mir-1a
MI0021033
-
mse-mir-1b
MI0021043
-
ngi-mir-1
MI0016626
-
nvi-mir-1
MI0014753
-
chr2
11310810
11310890
-
oan-mir-1a
MI0006700
-
7
18283571
18283672
+
oan-mir-1b
MI0006876
-
Ultra299
214301
214362
+
oan-mir-206
MI0006779
-
Contig26568
2813
2934
+
odi-mir-1c
MI0007135
-
ola-mir-1-1
MI0019437
-
7
5261661
5261761
+
ola-mir-1-2
MI0019525
-
17
29410125
29410225
-
ola-mir-206
MI0019552
-
24
13641157
13641256
+
pma-mir-1a
MI0016999
-
pma-mir-1b
MI0017000
-
pma-mir-1c
MI0017001
-
pol-mir-1
MI0022189
-
pol-mir-206
MI0022206
-
ppa-mir-1
MI0002930
-
ppc-mir-1
MI0011127
-
Ppa_Contig101
361557
361660
-
ppy-mir-1-1
MI0014778
-
20
60885111
60885181
+
ppy-mir-206
MI0002619
-
6
52482243
52482328
+
ptr-mir-1-1
MI0008412
-
20
59821417
59821486
+
ptr-mir-1-2
MI0008422
-
18
17497995
17498078
-
ptr-mir-206
MI0008576
-
6
52856204
52856288
+
rno-mir-1
MI0003489
-
18
2191671
2191757
-
rno-mir-206
MI0000948
-
9
19401985
19402068
+
rno-mir-3571
MI0015440
-
18
2191660
2191770
+
sko-mir-1
MI0010145
2.65e+04
spu-mir-1
MI0010186
1.51e+04
gb|DS000902|
262915
263010
+
ssc-mir-1
MI0010682
-
17
64096222
64096329
+
ssc-mir-206
MI0013084
-
7
53111391
53111470
+
tca-mir-1
MI0008892
1.81e+04
chrLG5
12993495
12993566
-
tgu-mir-1-1
MI0013781
-
chr20
10493672
10493743
-
tgu-mir-1-2
MI0013780
-
chr2
108164864
108164935
-
tni-mir-1
MI0003424
-
15_random
1423482
1423573
-
tur-mir-1
MI0019395
-
xla-mir-1b
MI0008372
-
xtr-mir-1a-1
MI0004789
-
GL172720.1
2261582
2261665
-
xtr-mir-1a-2
MI0004788
-
GL173652.1
56426
56496
+
xtr-mir-1b
MI0004890
-
GL173047.1
700225
700286
+
xtr-mir-206
MI0004863
-
GL172699.1
2280854
2280923
+
Get selected sequences:
Stem-loop sequence
Mature sequence
Select sequences and output type, then click "Fetch Sequences":
Unaligned fasta format
ClustalW alignment