Stem-loop sequence hsa-mir-3622a

Accession MI0016013
Description Homo sapiens miR-3622a stem-loop
Gene family MIPF0001179; mir-3622
Stem-loop 
                   c     c         -g   g 
aauagagggugcacaggca gggag ucaggugag  cag g
||||||||||||||||||| ||||| |||||||||  |||  
uuaucucccacguguccgu cccuc aguccacuc  guc a
                   a     c         ga   g
Get sequence
Deep sequencing
5 reads, 4 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr8: 27559194-27559276 [+]
sense
OTTHUMT00000423049 ; RP11-16P20.4-001; exon 1
OTTHUMT00000423049 ; RP11-16P20.4-001; exon 1
antisense
ENST00000584551 ; MIR3622A-201; exon 1
Clustered miRNAs
< 10kb from hsa-mir-3622a
hsa-mir-3622b chr8: 27559190-27559284 [-]
hsa-mir-3622a chr8: 27559194-27559276 [+]
Database links

Mature sequence hsa-miR-3622a-5p

Accession MIMAT0018003
Sequence

14 -  

caggcacgggagcucaggugag

 - 35

Get sequence
Deep sequencing 4 reads, 3 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

Mature sequence hsa-miR-3622a-3p

Accession MIMAT0018004
Sequence

50 -  

ucaccugaccucccaugccugu

 - 71

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

References

1
PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).
2
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).