Stem-loop sequence ptc-MIR319i

Accession MI0002304
Description Populus trichocarpa miR319i stem-loop
Gene family MIPF0001104; MIR319
Stem-loop 
gu c    a   ag       c     u   -----     u   ag 
  g agaa ugg  guuccuu cagcc caa     gcauc uua  a
  | |||| |||  ||||||| ||||| |||     ||||| |||   
  c ucuu acc  cgaggga gucgg guu     uguag ggu  u
-u u    a   cu       a     -   uuauc     c   gg
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Genome context
Coordinates (JGI_Poptr2.0) Overlapping transcripts
scaffold_6: 24889057-24889145 [+]
intergenic

Mature sequence ptc-miR319i

Accession MIMAT0002010
Sequence

61 -  

uugggcugaagggagcuccc

 - 80

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Evidence by similarity; MI0002296

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).
2
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).