Stem-loop sequence hsa-mir-6085

AccessionMI0020362 (change log)
Symbol HGNC:MIR6085
DescriptionHomo sapiens miR-6085 stem-loop
Stem-loop
   -g   a  ag    ggg         aca    u augc  ag     ga    a 
5'   ucu cc  gugu   cccagcuuu   uagu c    ug  gccgg  uuuc u
     ||| ||  ||||   |||||||||   |||| |    ||  |||||  |||| g
3'   aga gg  cacg   gggucgggg   gucg g    ac  ugguc  aaag c
   ga   g  aa    agg         -aa    u gaaa  gu     -a    a 
Get sequence
Deep sequencing
12 reads, 0 reads per million, 10 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr15: 62343029-62343138 [+]
antisense
OTTHUMT00000256218 ; VPS13C-001; intron 1
OTTHUMT00000415997 ; VPS13C-002; intron 1
OTTHUMT00000416000 ; VPS13C-003; intron 1
OTTHUMT00000416001 ; VPS13C-004; intron 1
ENST00000249837 ; VPS13C-001; intron 1
ENST00000261517 ; VPS13C-002; intron 1
ENST00000395896 ; VPS13C-003; intron 1
ENST00000395898 ; VPS13C-004; intron 1
Database links

Mature sequence hsa-miR-6085

Accession MIMAT0023710
Sequence

83 - 

aaggggcugggggagcaca

 - 101

Get sequence
Deep sequencing8 reads, 8 experiments
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:22282338 "Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs" Voellenkle C, Rooij Jv, Guffanti A, Brini E, Fasanaro P, Isaia E, Croft L, David M, Capogrossi MC, Moles A, Felsani A, Martelli F RNA. 18:472-484(2012).