Stem-loop sequence hsa-mir-548ap

AccessionMI0017875 (change log)
Symbol HGNC:MIR548AP
DescriptionHomo sapiens miR-548ap stem-loop
Gene family MIPF0000317; mir-548
Literature search

57 open access papers mention hsa-mir-548ap
(171 sentences)

Stem-loop
   -acc    cc     ug   c           c   c     c   aa 
5'     aauu  uaggu  gug aaaaguaauug ggu uuugu auu  a
       ||||  |||||  ||| ||||||||||| ||| ||||| |||   
3'     uuag  aucca  cau uuuucauuaac cca aaaca uaa  a
   uuaa    aa     gu   -           a   a     a   cc 
Get sequence
Deep sequencing
7773 reads, 2.63 reads per million, 152 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr15: 85825635-85825730 [+]
antisense
OTTHUMT00000417109 ; RP11-561C5.5-002; intron 1
ENST00000559518 ; ADAMTS7P4-002; intron 1
Database links

Mature sequence hsa-miR-548ap-5p

Accession MIMAT0021037
Sequence

21 - 

aaaaguaauugcggucuuu

 - 39

Get sequence
Deep sequencing4706 reads, 147 experiments
Evidence not experimental
Predicted targets

Mature sequence hsa-miR-548ap-3p

Accession MIMAT0021038
Sequence

58 - 

aaaaaccacaauuacuuuu

 - 76

Get sequence
Deep sequencing2631 reads, 85 experiments
Evidence not experimental
Predicted targets

References

1
PMID:21558790 "Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis" Hansen TB, Kjems J, Bramsen JB RNA Biol. 8:378-383(2011).