Stem-loop sequence hsa-mir-378e

AccessionMI0016750 (change log)
Symbol HGNC:MIR378E
DescriptionHomo sapiens miR-378e stem-loop
Gene family MIPF0000168; mir-378
Literature search

190 open access papers mention hsa-mir-378e
(902 sentences)

Stem-loop
   -----          u      --gccag     gaca  gga 
5'      cugacuccag guccag       gggca    gu   c
        |||||||||| ||||||       |||||    ||   a
3'      gacugagguu cagguc       cccgu    ca   g
   uacag          -      accagaa     --ga  aga 
Get sequence
Deep sequencing
1186923 reads, 3.13e+03 reads per million, 143 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr5: 170028488-170028566 [+]
sense
OTTHUMT00000371845 ; KCNIP1-005; intron 1
OTTHUMT00000252833 ; KCNIP1-001; intron 1
OTTHUMT00000371758 ; KCNIP1-002; intron 1
OTTHUMT00000371759 ; KCNIP1-003; intron 1
OTTHUMT00000371760 ; KCNIP1-004; intron 1
ENST00000377360 ; KCNIP1-005; intron 1
ENST00000328939 ; KCNIP1-001; intron 1
ENST00000520740 ; KCNIP1-002; intron 1
ENST00000434108 ; KCNIP1-003; intron 1
ENST00000411494 ; KCNIP1-004; intron 1
ENST00000390656 ; KCNIP1-201; intron 2
Database links

Mature sequence hsa-miR-378e

Accession MIMAT0018927
Sequence

58 - 

acuggacuuggagucagga

 - 76

Get sequence
Deep sequencing1186912 reads, 143 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

References

1
PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).