Stem-loop sequence hsa-mir-1827

AccessionMI0008195 (change log)
Symbol HGNC:MIR1827
DescriptionHomo sapiens miR-1827 stem-loop
Gene family MIPF0000646; mir-1827
Literature search

7 open access papers mention hsa-mir-1827
(125 sentences)

Stem-loop
   --    - a  aca    u      aaag  au   a 
5'   ucag c gc   gccu cagccu    ca  gag a
     |||| | ||   |||| ||||||    ||  |||  
3'   aguu g ug   cgga gucgga    gu  cuc g
   ua    a a  --a    -      --aa  --   c 
Get sequence
Deep sequencing
9371 reads, 29.1 reads per million, 79 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr12: 100189884-100189949 [+]
antisense
OTTHUMT00000408425 ; ANKS1B-002; intron 1
OTTHUMT00000408421 ; ANKS1B-003; intron 4
OTTHUMT00000408453 ; ANKS1B-001; intron 4
ENST00000547010 ; ANKS1B-002; intron 1
ENST00000547776 ; ANKS1B-003; intron 4
ENST00000549866 ; ANKS1B-001; intron 4
ENST00000329257 ; ANKS1B-201; intron 4
Database links

Mature sequence hsa-miR-1827

Accession MIMAT0006767
Sequence

49 - 

ugaggcaguagauugaau

 - 66

Get sequence
Deep sequencing9361 reads, 92 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).