Stem-loop sequence hsa-mir-6514

Accession

MI0022226 (change log)

Symbol

HGNC:MIR6514

Description

Homo sapiens miR-6514 stem-loop

Literature search

1 open access papers mention hsa-mir-6514
(2 sentences)

Stem-loop

   ua         cuuu   cuggcauuuacgaguc 
5'   uggagugga    cag                a
     |||||||||    |||                g
3'   accucaccu    guc                a
   -g         ucuu   cgucgagacauucuug 

Deep sequencing

847 reads, 0 reads per million, 90 experiments

Confidence

Annotation confidence: high

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr11: 62792702-62792771 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-6514

• hsa-mir-6514: chr11: 62792702-62792771 [-]
• hsa-mir-6748: chr11: 62789815-62789885 [+]

Database links

• HGNC:MIR6514
• RNAcentral:URS000075BA81_9606
• miRBase Tracker:MI0022226

Mature sequence hsa-miR-6514-5p

• Accession: MIMAT0025484
• Sequence: 1 - uauggaguggacuuucagcuggc - 23
• Deep sequencing: 786 reads, 80 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000075B538_9606
• Predicted targets:
  • TargetScanVert:hsa-miR-6514-5p
  • miRDB:hsa-miR-6514-5p

Mature sequence hsa-miR-6514-3p

• Accession: MIMAT0025485
• Sequence: 50 - cugccuguucuuccacuccag - 70
• Deep sequencing: 35 reads, 24 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6514-3p
  • miRDB:hsa-miR-6514-3p

References

1. PMID:21807764 "Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome" Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM Hum Mol Genet. 20:4025-4040(2011).