Stem-loop sequence hsa-mir-5685

Accession

MI0019287 (change log)

Symbol

HGNC:MIR5685

Description

Homo sapiens miR-5685 stem-loop

Stem-loop

                   a                 cucc 
5' cucuacaucacagccc gcaguuaucacgggccc    c
   |||||||||||||||| |||||||||||||||||    c
3' gagauguagugucggg cgucaauagugcccggg    u
                   a                 uaac 

Deep sequencing

38 reads, 21.4 reads per million, 28 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr6: 53276993-53277071 [+]
• Overlapping transcripts:

  intergenic

Database links

• HGNC:MIR5685
• miRBase Tracker:MI0019287

Mature sequence hsa-miR-5685

• Accession: MIMAT0022475
• Sequence: 10 - acagcccagcaguuaucacggg - 31
• Deep sequencing: 14 reads, 13 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-5685
  • TargetScanVert:hsa-miR-5685
  • miRDB:hsa-miR-5685

References

1. PMID:21980368 "MicroRNAs associated with metastatic prostate cancer" Watahiki A, Wang Y, Morris J, Dennis K, O'Dwyer HM, Gleave M, Gout PW, Wang Y PLoS One. 6:e24950(2011).