Stem-loop sequence rno-mir-293

Accession MI0012609
Description Rattus norvegicus miR-293 stem-loop
Gene family MIPF0000068; mir-290
Stem-loop 
--cu        -      g    a      g    u 
    gugauacu caaacu ugug cacuuu uuuc u
    |||||||| |||||| |||| |||||| ||||  
    cauuguga guuuga acgc gugaag aagg u
uagc        c      a    c      -    u
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Genome context
Coordinates (RGSC3.4) Overlapping transcripts
1: 64273328-64273399 [-]
intergenic
Clustered miRNAs
< 10kb from rno-mir-293
rno-mir-290 1: 64274926-64275006 [-]
rno-mir-291a 1: 64274628-64274709 [-]
rno-mir-292 1: 64274340-64274421 [-]
rno-mir-291b 1: 64274052-64274159 [-]
rno-mir-293 1: 64273328-64273399 [-]
rno-mir-294 1: 64272967-64273037 [-]
rno-mir-295-1 1: 64272844-64272924 [-]
Database links
  • ENTREZGENE: 100314136;Mir293

Mature sequence rno-miR-293-5p

Accession MIMAT0012847
Previous IDs rno-miR-293
Sequence

8 -  

acucaaacugugugacacuuu

 - 28

Get sequence
Evidence experimental; SOLiD [2]
Validated targets
Predicted targets

Mature sequence rno-miR-293-3p

Accession MIMAT0017365
Previous IDs rno-miR-293*
Sequence

44 -  

agugccgcaaaguuugcagugu

 - 65

Get sequence
Evidence experimental; SOLiD [2]
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).