Stem-loop sequence rno-mir-201

Accession MI0012608
Description Rattus norvegicus miR-201 stem-loop
Gene family MIPF0000386; mir-743
Stem-loop 
--     g   -  c  u   u     a      uuc   a 
  guaca uac cu ac cag aaggc uuguuc   uau c
  ||||| ||| || || ||| ||||| ||||||   |||  
  cgugu aug ga ug guc uuccg gacaag   aua u
aa     a   c  -  u   u     c      uaa   a
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Genome context
Coordinates (RGSC3.4) Overlapping transcripts
X: 154169141-154169220 [-]
intergenic
Clustered miRNAs
< 10kb from rno-mir-201
rno-mir-547 X: 154169439-154169519 [-]
rno-mir-201 X: 154169141-154169220 [-]
rno-mir-3585 X: 154164067-154164184 [-]
Database links
  • ENTREZGENE: 100314135;Mir201

Mature sequence rno-miR-201-5p

Accession MIMAT0012846
Previous IDs rno-miR-201
Sequence

12 -  

cacucaguaaggcauuguuc

 - 31

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Evidence experimental; SOLiD [2]
Predicted targets

Mature sequence rno-miR-201-3p

Accession MIMAT0017364
Previous IDs rno-miR-201*
Sequence

47 -  

ugaacagcgccuuucuguguag

 - 68

Get sequence
Evidence experimental; SOLiD [2]
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).