Stem-loop sequence rno-mir-874

Accession MI0006118
Description Rattus norvegicus miR-874 stem-loop
Gene family MIPF0000401; mir-874
Stem-loop 
--      cug   c   a  ca        a ag  a 
  uuagcc   cgg ccc cg  ccagggua g  ag c
  ||||||   ||| ||| ||  |||||||| |  || u
  ggucgg   gcc ggg gc  ggucccgu c  uc c
cg      uca   a   a  cc        - cu  g
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Genome context
Coordinates (RGSC3.4) Overlapping transcripts
17: 12597361-12597436 [+]
sense
ENSRNOT00000034877 ; Klhl3; intron 6
ENSRNOT00000034877 ; Klhl3; intron 6
ENSRNOT00000034877 ; Klhl3; intron 6
Database links
  • ENTREZGENE: 100314096;Mir874

Mature sequence rno-miR-874-5p

Accession MIMAT0017290
Previous IDs rno-miR-874*
Sequence

10 -  

cggccccacgcaccaggguaa

 - 30

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Evidence experimental; SOLiD [2]
Predicted targets

Mature sequence rno-miR-874-3p

Accession MIMAT0005284
Previous IDs rno-miR-874
Sequence

45 -  

cugcccuggcccgagggaccga

 - 66

Get sequence
Evidence experimental; SOLiD [2]
Predicted targets

References

1
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
2
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).