Stem-loop sequence hsa-mir-593

Accession MI0003605
Symbol HGNC:MIR593
Description Homo sapiens miR-593 stem-loop
Gene family MIPF0000503; mir-593
Stem-loop 
-------c      aaucugu    c  c    a     ug   agccc       u 
        ccccag       cagg ac agcc ggcau  cuc     guuuccc c
        ||||||       |||| || |||| |||||  |||     |||||||  
        gggguc       gucu ug uugg ucgug  gag     cgagggg u
uccucuuu      -------    c  u    g     gu   --gaa       g
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Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr7: 127721913-127722012 [+]
sense
OTTHUMT00000349157 ; SND1-010; intron 3
OTTHUMT00000349157 ; SND1-010; intron 3
OTTHUMT00000349157 ; SND1-010; intron 3
OTTHUMT00000349163 ; SND1-016; intron 5
OTTHUMT00000349163 ; SND1-016; intron 5
OTTHUMT00000349163 ; SND1-016; intron 5
OTTHUMT00000349148 ; SND1-001; intron 18
OTTHUMT00000349148 ; SND1-001; intron 18
OTTHUMT00000349148 ; SND1-001; intron 18
ENST00000470463 ; SND1-010; intron 3
ENST00000470463 ; SND1-010; intron 3
ENST00000470463 ; SND1-010; intron 3
ENST00000486037 ; SND1-016; intron 5
ENST00000486037 ; SND1-016; intron 5
ENST00000486037 ; SND1-016; intron 5
ENST00000354725 ; SND1-001; intron 18
ENST00000354725 ; SND1-001; intron 18
ENST00000354725 ; SND1-001; intron 18
ENST00000438400 ; SND1-201; intron 19
ENST00000438400 ; SND1-201; intron 19
Database links

Mature sequence hsa-miR-593-5p

Accession MIMAT0003261
Previous IDs hsa-miR-593;hsa-miR-593*
Sequence

16 -  

aggcaccagccaggcauugcucagc

 - 40

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Evidence experimental; SAGE [1]
Predicted targets

Mature sequence hsa-miR-593-3p

Accession MIMAT0004802
Previous IDs hsa-miR-593
Sequence

79 -  

ugucucugcugggguuucu

 - 97

Get sequence
Evidence experimental; cloned [2]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).