Stem-loop sequence hsa-mir-599

Accession MI0003611
Symbol HGNC:MIR599
Description Homo sapiens miR-599 stem-loop
Gene family MIPF0000502; mir-599
Stem-loop 
aaagacaugcu     c     --                 gg     -   u 
           gucca agugu  guuugauaagcugacau  gacag gga u
           ||||| |||||  |||||||||||||||||  ||||| ||| c
           uaggu ucaua  caaacuauuugacugug  uuguc cuu u
--------cag     -     cc                 --     a   u
Get sequence
Deep sequencing
5 reads, 4 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr8: 100548864-100548958 [-]
antisense
OTTHUMT00000379825 ; VPS13B-009; intron 1
OTTHUMT00000379825 ; VPS13B-009; intron 1
OTTHUMT00000379825 ; VPS13B-009; intron 1
OTTHUMT00000277137 ; VPS13B-001; intron 30
OTTHUMT00000277138 ; VPS13B-002; intron 30
OTTHUMT00000277137 ; VPS13B-001; intron 30
OTTHUMT00000277138 ; VPS13B-002; intron 30
OTTHUMT00000277137 ; VPS13B-001; intron 30
OTTHUMT00000277138 ; VPS13B-002; intron 30
OTTHUMT00000277139 ; VPS13B-003; intron 31
OTTHUMT00000277139 ; VPS13B-003; intron 31
OTTHUMT00000277139 ; VPS13B-003; intron 31
ENST00000521559 ; VPS13B-009; intron 1
ENST00000521559 ; VPS13B-009; intron 1
ENST00000521559 ; VPS13B-009; intron 1
ENST00000357162 ; VPS13B-001; intron 30
ENST00000358544 ; VPS13B-002; intron 30
ENST00000357162 ; VPS13B-001; intron 30
ENST00000358544 ; VPS13B-002; intron 30
ENST00000357162 ; VPS13B-001; intron 30
ENST00000358544 ; VPS13B-002; intron 30
ENST00000496144 ; VPS13B-003; intron 31
ENST00000395996 ; VPS13B-201; intron 31
ENST00000496144 ; VPS13B-003; intron 31
ENST00000395996 ; VPS13B-201; intron 31
ENST00000496144 ; VPS13B-003; intron 31
ENST00000395996 ; VPS13B-201; intron 31
Clustered miRNAs
< 10kb from hsa-mir-599
hsa-mir-875 chr8: 100549014-100549089 [-]
hsa-mir-599 chr8: 100548864-100548958 [-]
Database links

Mature sequence hsa-miR-599

Accession MIMAT0003267
Sequence

61 -  

guugugucaguuuaucaaac

 - 80

Get sequence
Evidence experimental; SAGE [1]
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).