Stem-loop sequence hsa-mir-590

Accession MI0003602
Symbol HGNC:MIR590
Description Homo sapiens miR-590 stem-loop
Gene family MIPF0000418; mir-590
Stem-loop 
--------uagc        a  g       u       g     ua   u 
            cagucaga au agcuuau cauaaaa ugcag  ugg g
            |||||||| || ||||||| ||||||| |||||  ||| a
            guuagucu ug ucgaaua guauuuu auguc  acu a
acgacguacaaa        c  a       u       a     ua   g
Get sequence
Deep sequencing
1004 reads, 32 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr7: 73605528-73605624 [+]
sense
OTTHUMT00000252376 ; EIF4H-002; intron 4
OTTHUMT00000252376 ; EIF4H-002; intron 4
OTTHUMT00000252376 ; EIF4H-002; intron 4
OTTHUMT00000252375 ; EIF4H-001; intron 5
OTTHUMT00000348467 ; EIF4H-005; intron 5
OTTHUMT00000252375 ; EIF4H-001; intron 5
OTTHUMT00000348467 ; EIF4H-005; intron 5
OTTHUMT00000252375 ; EIF4H-001; intron 5
OTTHUMT00000348467 ; EIF4H-005; intron 5
ENST00000353999 ; EIF4H-002; intron 4
ENST00000353999 ; EIF4H-002; intron 4
ENST00000353999 ; EIF4H-002; intron 4
ENST00000265753 ; EIF4H-001; intron 5
ENST00000495187 ; EIF4H-005; intron 5
ENST00000265753 ; EIF4H-001; intron 5
ENST00000495187 ; EIF4H-005; intron 5
ENST00000265753 ; EIF4H-001; intron 5
ENST00000495187 ; EIF4H-005; intron 5
Database links

Mature sequence hsa-miR-590-5p

Accession MIMAT0003258
Previous IDs hsa-miR-590
Sequence

16 -  

gagcuuauucauaaaagugcag

 - 37

Get sequence
Deep sequencing 859 reads, 29 experiments
Evidence experimental; Microarray [1], SAGE [1], cloned [2]
Validated targets
Predicted targets

Mature sequence hsa-miR-590-3p

Accession MIMAT0004801
Sequence

56 -  

uaauuuuauguauaagcuagu

 - 76

Get sequence
Deep sequencing 142 reads, 18 experiments
Evidence experimental; cloned [2]
Validated targets
Predicted targets

References

1
PMID:16505370 "The colorectal microRNAome" Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE Proc Natl Acad Sci U S A. 103:3687-3692(2006).
2
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).