Stem-loop sequence fru-mir-217

Accession MI0003289
Description Fugu rubripes miR-217 stem-loop
Gene family MIPF0000077; mir-217
Stem-loop 
augaagagc   c ug    g  u a  c         a    a    c   ug 
         cuu u  augc ga g ua ugcaucagg acug uugg uga  c
         ||| |  |||| || | || ||||||||| |||| |||| |||   
         gaa a  uacg cu c gu acguagucc ugac aacc auu  u
--------a   - gu    a  u c  u         a    -    c   uu
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Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
Coordinates (FUGU5) Overlapping transcripts
HE602538.1: 10290639-10290738 [-]
intergenic
Clustered miRNAs
< 10kb from fru-mir-217
fru-mir-216b HE602538.1: 10291881-10291957 [-]
fru-mir-216a HE602538.1: 10291197-10291269 [-]
fru-mir-217 HE602538.1: 10290639-10290738 [-]

Mature sequence fru-miR-217

Accession MIMAT0002971
Sequence

27 -  

uacugcaucaggaacugauugg

 - 48

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Evidence by similarity; MI0002050