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miRBase |
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Stem-loop sequence hsa-mir-187 |
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Accession | MI0000274 (change log) | ||||
Symbol | HGNC:MIR187 | ||||
Description | Homo sapiens miR-187 stem-loop | ||||
Gene family | MIPF0000078; mir-187 | ||||
Literature search |
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52 open access papers mention hsa-mir-187 | ||||
Stem-loop |
g u caccaugacacag aga g a c - c - ug 5' g cgggcu ugug ccuc ggcu caacacaggac cg gg g c c | |||||| |||| |||| |||| ||||||||||| || || | | 3' c gccugg acgc ggag ccga guuguguucug gc cc c g u a - ------------- -ag g c u u c a uc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR. Landgraf et al. confirm expression in human [2]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. |
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Genome context |
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Database links |
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Mature sequence hsa-miR-187-5p |
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Accession | MIMAT0004561 |
Previous IDs | hsa-miR-187* |
Sequence |
35 - ggcuacaacacaggacccgggc - 56 |
Deep sequencing | 159 reads, 36 experiments |
Evidence | experimental; cloned [2] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-187-3p |
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Accession | MIMAT0000262 |
Previous IDs | hsa-miR-187 |
Sequence |
71 - ucgugucuuguguugcagccgg - 92 |
Deep sequencing | 11807 reads, 99 experiments |
Evidence | experimental; cloned [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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