Stem-loop sequence gga-mir-9b-1

AccessionMI0040667 (change log)
DescriptionGallus gallus miR-9b-1 stem-loop
Literature search

19 open access papers mention gga-mir-9b-1
(326 sentences)

Stem-loop
   -uuc            u     -  gcu 
5'     gguuaucuagcu uauga ug   c
       |||||||||||| ||||| ||   c
3'     ccaauagaucga auacu ac   a
   gaaa            c     c  aac 
Get sequence
Deep sequencing
3794 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr10: 12934137-12934193 [+]
intergenic
Clustered miRNAs
< 10kb from gga-mir-9b-1
gga-mir-9-3chr10: 12934122-12934207 [-]
gga-mir-9b-1chr10: 12934137-12934193 [+]
Database links

Mature sequence gga-miR-9b-5p

Accession MIMAT0049903
Sequence

1 - 

uucgguuaucuagcuuuauga

 - 21

Get sequence
Deep sequencing7398 reads, 5 experiments
Evidence experimental; Illumina [1]

Mature sequence gga-miR-9b-3p

Accession MIMAT0049904
Sequence

38 - 

auacagcuagauaaccaaag

 - 57

Get sequence
Deep sequencing122 reads, 3 experiments
Evidence experimental; Illumina [1]

References

1
PMID:29079676 "Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation" Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H Genome Res. [Epub prior to print](2017).