Stem-loop sequence mmu-mir-3473h

Accession

MI0040641 (change log)

Description

Mus musculus miR-3473h stem-loop

Literature search

3 open access papers mention mmu-mir-3473h
(69 sentences)

Stem-loop

   --     --g      ag  gac      g u 
5'   uaggg   cuggaa  gu   ucagug u a
     |||||   ||||||  ||   |||||| |  
3'   guccu   gaccuu  cg   agucac a a
   ga     gga      cu  -uc      g g 

Deep sequencing

7089 reads, 1.82e+03 reads per million, 151 experiments

Confidence

Annotation confidence: low

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr3: 116667557-116667617 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0040641

Mature sequence mmu-miR-3473h-5p

• Accession: MIMAT0049861
• Sequence: 1 - uaggggcuggaaaggugacu - 20
• Deep sequencing: 1342 reads, 55 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:29079676 "Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation" Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H Genome Res. [Epub prior to print](2017).