Stem-loop sequence mmu-mir-9b-1

AccessionMI0040640 (change log)
DescriptionMus musculus miR-9b-1 stem-loop
Literature search

208 open access papers mention mmu-mir-9b-1
(1070 sentences)

Stem-loop
   --uuc            u     agacuc 
5'      gguuaucuagcu uauga      c
        |||||||||||| |||||       
3'      ccaauagaucga auacu      a
   agaaa            c     caccac 
Get sequence
Deep sequencing
3545 reads, 34.6 reads per million, 26 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr3: 88215613-88215670 [-]
intergenic
Clustered miRNAs
< 10kb from mmu-mir-9b-1
mmu-mir-9b-1chr3: 88215613-88215670 [-]
mmu-mir-9-1chr3: 88215598-88215686 [+]
mmu-mir-3093chr3: 88215171-88215257 [+]
Database links

Mature sequence mmu-miR-9b-5p

Accession MIMAT0049835
Sequence

1 - 

uucgguuaucuagcuuuauga

 - 21

Get sequence
Deep sequencing8374 reads, 22 experiments
Evidence experimental; Illumina [1]

Mature sequence mmu-miR-9b-3p

Accession MIMAT0049836
Sequence

38 - 

auacagcuagauaaccaaaga

 - 58

Get sequence
Deep sequencing2175 reads, 20 experiments
Evidence experimental; Illumina [1]

References

1
PMID:29079676 "Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation" Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H Genome Res. [Epub prior to print](2017).