Stem-loop sequence ocu-mir-20a

AccessionMI0039231 (change log)
DescriptionOryctolagus cuniculus miR-20a stem-loop
Stem-loop 
   ---ua                 g   -  uu 
5'      aagugcuuauagugcag uag ug  u
        ||||||||||||||||| ||| ||   
3'      uucacgaguauuacguc auc au  a
   ugaaa                 -   u  ug
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (OryCun2.0; GCA_000003625.1) Overlapping transcripts
CM000797.1: 93068174-93068232 [+]
intergenic
Clustered miRNAs
< 10kb from ocu-mir-20a
ocu-mir-17CM000797.1: 93067701-93067759 [+]
ocu-mir-18aCM000797.1: 93067839-93067903 [+]
ocu-mir-19aCM000797.1: 93067987-93068044 [+]
ocu-mir-20aCM000797.1: 93068174-93068232 [+]
ocu-mir-19b-1CM000797.1: 93068307-93068367 [+]
ocu-mir-92a-1CM000797.1: 93068424-93068482 [+]
Database links

Mature sequence ocu-miR-20a-5p

Accession MIMAT0048120
Sequence

1 -  

uaaagugcuuauagugcagguag

 - 23

Get sequence
Evidence experimental; Illumina [1]

Mature sequence ocu-miR-20a-3p

Accession MIMAT0048121
Sequence

37 -  

acugcauuaugagcacuuaaagu

 - 59

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).