Stem-loop sequence ocu-mir-17

AccessionMI0039225 (change log)
DescriptionOryctolagus cuniculus miR-17 stem-loop
Stem-loop
   --ca        a  g     g   -  au 
5'     aagugcuu ca ugcag uag ug  a
       |||||||| || ||||| ||| ||  u
3'     uucacgga gu acguc auc ac  g
   gaug        a  g     -   u  gu 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (OryCun2.0; GCA_000003625.1) Overlapping transcripts
CM000797.1: 93067701-93067759 [+]
intergenic
Clustered miRNAs
< 10kb from ocu-mir-17
ocu-mir-17CM000797.1: 93067701-93067759 [+]
ocu-mir-18aCM000797.1: 93067839-93067903 [+]
ocu-mir-19aCM000797.1: 93067987-93068044 [+]
ocu-mir-20aCM000797.1: 93068174-93068232 [+]
ocu-mir-19b-1CM000797.1: 93068307-93068367 [+]
ocu-mir-92a-1CM000797.1: 93068424-93068482 [+]
Database links

Mature sequence ocu-miR-17-5p

Accession MIMAT0048109
Sequence

1 - 

caaagugcuuacagugcagguag

 - 23

Get sequence
Evidence experimental; Illumina [1]

Mature sequence ocu-miR-17-3p

Accession MIMAT0048110
Sequence

38 - 

acugcagugaaggcacuuguag

 - 59

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).