Stem-loop sequence dno-mir-199-1

AccessionMI0039032 (change log)
DescriptionDasypus novemcinctus miR-199-1 stem-loop
Stem-loop
   --c       u        c   --uca  ac 
5'    ccagugu cagacuac ugu     gg  a
      ||||||| |||||||| |||     ||   
3'    gguuaca gucugaug aca     cc  a
   auu       c        -   uguug  gu 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dasNov3.0; GCA_000208655.2) Overlapping transcripts
JH566029.1: 1167422-1167482 [-]
intergenic
Clustered miRNAs
< 10kb from dno-mir-199-1
dno-mir-199-1JH566029.1: 1167422-1167482 [-]
dno-mir-214JH566029.1: 1161622-1161684 [-]
Database links

Mature sequence dno-miR-199-5p

Accession MIMAT0047737
Sequence

1 - 

cccaguguucagacuaccuguuc

 - 23

Get sequence
Evidence experimental; Illumina [1]

Mature sequence dno-miR-199-3p

Accession MIMAT0047738
Sequence

40 - 

acaguagucugcacauugguua

 - 61

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).