Stem-loop sequence cpo-mir-369

AccessionMI0038748 (change log)
DescriptionCavia porcellus miR-369 stem-loop
Stem-loop
   --             ua      cuucc 
5'   agaucgaccgugu  uauucg     u
     |||||||||||||  ||||||      
3'   ucuaguugguaca  auaagc     u
   uu             ua      uucag 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (cavPor3; GCA_000151735.1) Overlapping transcripts
DS562966.1: 1117336-1117391 [+]
intergenic
Clustered miRNAs
< 10kb from cpo-mir-369
cpo-mir-134DS562966.1: 1107399-1107459 [+]
cpo-mir-485DS562966.1: 1108140-1108198 [+]
cpo-mir-154DS562966.1: 1112305-1112362 [+]
cpo-mir-496DS562966.1: 1113040-1113093 [+]
cpo-mir-377DS562966.1: 1114436-1114495 [+]
cpo-mir-541DS562966.1: 1116256-1116321 [+]
cpo-mir-409DS562966.1: 1117072-1117125 [+]
cpo-mir-412DS562966.1: 1117221-1117276 [+]
cpo-mir-369DS562966.1: 1117336-1117391 [+]
cpo-mir-410DS562966.1: 1117656-1117711 [+]
cpo-mir-323bDS562966.1: 1118056-1118114 [+]
cpo-mir-656DS562966.1: 1118353-1118408 [+]
Database links

Mature sequence cpo-miR-369-5p

Accession MIMAT0047199
Sequence

1 - 

agaucgaccguguuauauucg

 - 21

Get sequence
Evidence experimental; Illumina [1]

Mature sequence cpo-miR-369-3p

Accession MIMAT0047200
Sequence

36 - 

aauaauacaugguugaucuuu

 - 56

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).