Stem-loop sequence cpo-mir-19b-2

AccessionMI0038570 (change log)
DescriptionCavia porcellus miR-19b-2 stem-loop
Stem-loop
   --         -  -      uuu    -  a    u 
5'   aguuuugca gg uuugca   cagc gu uaga a
     ||||||||| || ||||||   |||| || ||||  
3'   ucaaaacgu cc aaacgu   gucg ua aucu u
   ag         a  u      ---    g  c    a 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (cavPor3; GCA_000151735.1) Overlapping transcripts
DS562983.1: 2512548-2512615 [-]
intergenic
Clustered miRNAs
< 10kb from cpo-mir-19b-2
cpo-mir-106aDS562983.1: 2513060-2513118 [-]
cpo-mir-18bDS562983.1: 2512897-2512961 [-]
cpo-mir-20bDS562983.1: 2512676-2512744 [-]
cpo-mir-19b-2DS562983.1: 2512548-2512615 [-]
cpo-mir-92a-2DS562983.1: 2512411-2512471 [-]
cpo-mir-363DS562983.1: 2512251-2512315 [-]
Database links

Mature sequence cpo-miR-19b-2-5p

Accession MIMAT0046867
Sequence

1 - 

aguuuugcagguuugcauuuc

 - 21

Get sequence
Evidence not experimental

Mature sequence cpo-miR-19b-3p

Accession MIMAT0046866
Sequence

46 - 

ugugcaaauccaugcaaaacuga

 - 68

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).