Stem-loop sequence cpo-let-7d

AccessionMI0038545 (change log)
DescriptionCavia porcellus let-7d stem-loop
Stem-loop
   --               c      uuagggcagggauu 
5'   agagguaguagguug auaguu              u
     ||||||||||||||| ||||||               
3'   uuuccgucguccagc uaucaa              u
   uc               a      uggaggaacacccg 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (cavPor3; GCA_000151735.1) Overlapping transcripts
DS562897.1: 104190-104265 [+]
intergenic
Clustered miRNAs
< 10kb from cpo-let-7d
cpo-let-7a-1DS562897.1: 101718-101790 [+]
cpo-let-7f-1DS562897.1: 102055-102138 [+]
cpo-let-7dDS562897.1: 104190-104265 [+]
Database links

Mature sequence cpo-let-7d-5p

Accession MIMAT0046824
Sequence

1 - 

agagguaguagguugcauaguu

 - 22

Get sequence
Evidence experimental; Illumina [1]

Mature sequence cpo-let-7d-3p

Accession MIMAT0046825
Sequence

55 - 

cuauacgaccugcugccuuucu

 - 76

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).