Stem-loop sequence bta-mir-2285bt

Accession

MI0038363 (change log)

Description

Bos taurus miR-2285bt stem-loop

Literature search

11 open access papers mention bta-mir-2285bt
(15 sentences)

Stem-loop

   -a        a     guug       c 
5'   aaaaguuc uuugg    ucuguaa a
     |||||||| |||||    |||||||  
3'   uuuucaag aaacc    agguauu u
   gg        c     aaaa       c 

Deep sequencing

6697 reads, 22.1 reads per million, 68 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr21: 62129493-62129549 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038363

Mature sequence bta-miR-2285bt

• Accession: MIMAT0046639
• Sequence: 1 - aaaaaguucauuuggguugucu - 22
• Deep sequencing: 6687 reads, 67 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).