Stem-loop sequence pal-mir-376a

AccessionMI0032628 (change log)
DescriptionPteropus alecto miR-376a stem-loop
Literature search

1 open access papers mention pal-mir-376a
(1 sentences)

Stem-loop
   --ua    c    u      --gua   u 
5'     gauu uccu cuauga     cau a
       |||| |||| ||||||     ||| u
3'     cuaa agga gauacu     gua u
   gcac    a    -      aauua   u 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM32557v1; GCA_000325575.1) Overlapping transcripts
KB031153.1: 22085130-22085185 [+]
intergenic
Clustered miRNAs
< 10kb from pal-mir-376a
pal-mir-543KB031153.1: 22077011-22077068 [+]
pal-mir-495KB031153.1: 22078847-22078904 [+]
pal-mir-3958KB031153.1: 22080829-22080884 [+]
pal-mir-376cKB031153.1: 22084045-22084102 [+]
pal-mir-376dKB031153.1: 22084388-22084445 [+]
pal-mir-376bKB031153.1: 22084768-22084825 [+]
pal-mir-376aKB031153.1: 22085130-22085185 [+]
pal-mir-1185KB031153.1: 22086787-22086846 [+]
pal-mir-381KB031153.1: 22088438-22088496 [+]
pal-mir-487bKB031153.1: 22088954-22089011 [+]
pal-mir-889KB031153.1: 22090283-22090341 [+]
pal-mir-544KB031153.1: 22091066-22091122 [+]
pal-mir-3959KB031153.1: 22093968-22094021 [+]
pal-mir-487aKB031153.1: 22094380-22094437 [+]
Database links

Mature sequence pal-miR-376a-5p

Accession MIMAT0040355
Sequence

1 - 

uagauucuccuucuaugaguac

 - 22

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pal-miR-376a-3p

Accession MIMAT0040356
Sequence

36 - 

aaucauagaggaaaauccacg

 - 56

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25128405 "Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing" Cowled C, Stewart CR, Likic VA, Friedlander MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF BMC Genomics. 15:682(2014).