Stem-loop sequence rno-mir-193b

AccessionMI0030355 (change log)
DescriptionRattus norvegicus miR-193b stem-loop
Gene family MIPF0000082; mir-193
Literature search

23 open access papers mention rno-mir-193b
(127 sentences)

Stem-loop
       g       u    gu    a    g  a  ag uug 
5' gugg cccagaa cggg  uuug gggc ag ug  u   u
   |||| ||||||| ||||  |||| |||| || ||  |   g
3' uacu ggguuuu gccc  aaac cccg uc ac  a   u
       g       c    ug    a    g  a  cu uuu 
Get sequence
Deep sequencing
50449 reads, 9.39 reads per million, 490 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr14: 30331049-30331131 [-]
intergenic
Database links

Mature sequence rno-miR-193b-5p

Accession MIMAT0035733
Sequence

15 - 

gggguuuugagggcgaga

 - 32

Get sequence
Deep sequencing317 reads, 157 experiments
Evidence experimental; RNAseq-metaanalysis [1]
Predicted targets

Mature sequence rno-miR-193b-3p

Accession MIMAT0035734
Sequence

51 - 

aacuggcccacaaaguccc

 - 69

Get sequence
Deep sequencing50130 reads, 490 experiments
Evidence experimental; RNAseq-metaanalysis [1]
Predicted targets

References

1
PMID:23329697 "Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters" Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A RNA. 19:365-379(2013).