Stem-loop sequence cli-mir-449b

AccessionMI0030043 (change log)
DescriptionColumba livia miR-449b stem-loop
Stem-loop
   ------     u u   a         cugcu  c       cg   c 
5'       cugug c ggu ggcagugua     ag uggcugc  uau u
         ||||| | ||| |||||||||     || |||||||  |||  
3'       gacgu g cca ccgucacgu     uc acugacg  gua g
   ggucgg     c u   -         ---cc  -       ag   g 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CLiv1.0; GCA_000337935.1) Overlapping transcripts
KB375359.1: 2803297-2803383 [-]
intergenic
Clustered miRNAs
< 10kb from cli-mir-449b
cli-mir-449cKB375359.1: 2804268-2804358 [-]
cli-mir-449bKB375359.1: 2803297-2803383 [-]
cli-mir-449aKB375359.1: 2803138-2803226 [-]
cli-mir-449dKB375359.1: 2802140-2802228 [-]
Database links

Mature sequence cli-miR-449b-5p

Accession MIMAT0038637
Sequence

12 - 

aggcaguguacugcuagcuggcugc

 - 36

Get sequence
Evidence experimental; Illumina [1]

Mature sequence cli-miR-449b-3p

Accession MIMAT0038638
Sequence

53 - 

agucacuccugcacugccacc

 - 73

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).