Stem-loop sequence ami-mir-199-3

Accession

MI0029784 (change log)

Description

Alligator mississippiensis miR-199-3 stem-loop

Stem-loop

   u   - u c     c       u        c   u   gacu 
5'  cca c c gucug ccagugu cagacuac ugu cag    a
    ||| | | ||||| ||||||| |||||||| ||| |||     
3'  ggu g g cggau gguuaca gucugaug aca guu    c
   g   c u u     u       c        -   u   agag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (ASM28112v4; GCA_000281125.4): AKHW03006215.1: 13712816-13712901 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0029784

Mature sequence ami-miR-199-5p

• Accession: MIMAT0038216
• Sequence: 14 - cccaguguucagacuaccuguu - 35
• Evidence: experimental; Illumina [1]

Mature sequence ami-miR-199-3p

• Accession: MIMAT0038217
• Sequence: 53 - acaguagucugcacauugguua - 74
• Evidence: experimental; Illumina [1]

References

1. PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).