Stem-loop sequence bra-MIR9567

Accession

MI0029316 (change log)

Description

Brassica rapa miR9567 stem-loop

Literature search

1 open access papers mention bra-MIR9567
(1 sentences)

Stem-loop

   auu              a                         ua                 --a  aa 
5'    aguuacgcaucuaa caacacauauaguuugcagggugga  aaacuggcauuauaugu   ac  g
      |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||   ||   
3'    ucaaugcguagauu guuguguauaucaaacgucccaccu  uuugaucguaauauaca   ug  a
   ggu              c                         ug                 aga  gc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Brapa_1.1; GCA_000309985.1): chrA3: 17824435-17824572 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0029316

Mature sequence bra-miR9567-5p

• Accession: MIMAT0035693
• Sequence: 15 - uaaacaacacauauaguuugc - 35
• Evidence: experimental; Illumina [1]

Mature sequence bra-miR9567-3p

• Accession: MIMAT0035694
• Sequence: 106 - aaacuauauguguugcuuaga - 126
• Evidence: experimental; Illumina [1]

References

1. PMID:24559317 "Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis" Jiang J, Lv M, Liang Y, Ma Z, Cao J BMC Genomics. 15:146(2014).