Stem-loop sequence efu-mir-29a

AccessionMI0028886 (change log)
DescriptionEptesicus fuscus miR-29a stem-loop
Gene family MIPF0000009; mir-29
Stem-loop
   -    -gagg            uuu       c    ucaa 
5'  cuua     augacugauuuc   ugguguu agag    u
    ||||     ||||||||||||   ||||||| ||||    a
3'  gggu     uauuggcuaaag   accacga ucuu    c
   g    aguaa            ucu       -    uuaa 
Get sequence
Deep sequencing
1 reads, 1.3e+03 reads per million, 1 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (EptFus1.0; GCA_000308155.1) Overlapping transcripts
JH977672.1: 9215303-9215384 [+]
intergenic
Clustered miRNAs
< 10kb from efu-mir-29a
efu-mir-29bJH977672.1: 9214960-9215044 [+]
efu-mir-29aJH977672.1: 9215303-9215384 [+]
Database links

Mature sequence efu-miR-29a

Accession MIMAT0035176
Sequence

49 - 

cuagcaccaucugaaaucgguuau

 - 72

Get sequence
Deep sequencing1 reads, 1 experiments
Evidence experimental; Illumina [1]

References

1
PMID:24692655 "Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats" Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA Mol Biol Evol. 31:1536-1545(2014).