Stem-loop sequence eca-mir-8942

AccessionMI0028086 (change log)
DescriptionEquus caballus miR-8942 stem-loop
Stem-loop
   -----   aaa      ccu      -    uca  a    g   gcc     a    g 
5'      cug   aguucu   gcuccg gguc   gg cucu cug   aggcc aggc g
        |||   ||||||   |||||| ||||   || |||| |||   ||||| ||||  
3'      gac   ucgagg   uggggc ccag   uc gaga gau   uucgg ucug g
   cuuag   --c      --u      g    ---  -    g   ---     a    a 
Get sequence
Deep sequencing
2 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (EquCab2.0; GCF_000002305.2) Overlapping transcripts
NW_001869118.1: 41328-41430 [-]
intergenic
Database links

Mature sequence eca-miR-8942

Accession MIMAT0034471
Sequence

60 - 

uaggcuuuaggagagcuga

 - 78

Get sequence
Deep sequencing1 reads, 1 experiments
Evidence experimental; Illumina [1]

References

1
PMID:24692655 "Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats" Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA Mol Biol Evol. 31:1536-1545(2014).