Stem-loop sequence cel-mir-8207

Accession

MI0026840 (change log)

Description

Caenorhabditis elegans miR-8207 stem-loop

Stem-loop

   --    c         cu  uu    -  uuu    gau 
5'   uugu cucuuuucu  ca  ugca ca   uauu   a
     |||| |||||||||  ||  |||| ||   ||||    
3'   agca gagaaaaga  gu  acgu gu   auaa   u
   ag    a         ag  -u    a  --u    acu 

Deep sequencing

49 reads, 0 reads per million, 9 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (WBcel235; GCA_000002985.3): chrIV: 11722093-11722166 [+]
• Overlapping transcripts:

  sense

  K01A6.2b ; K01A6.2b; intron 1

  K01A6.2a ; K01A6.2a; intron 6

  K01A6.2c ; K01A6.2c; intron 6

Database links

• miRBase Tracker:MI0026840

Mature sequence cel-miR-8207-5p

• Accession: MIMAT0032831
• Sequence: 1 - uuguccucuuuucucucauuugca - 24
• Deep sequencing: 6 reads, 4 experiments
• Evidence: experimental; Illumina [1]

Mature sequence cel-miR-8207-3p

• Accession: MIMAT0032832
• Sequence: 52 - cauuggaagaaaagagaacgaga - 74
• Deep sequencing: 37 reads, 9 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:23729632 "Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes" Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C Genome Biol Evol. 5:1246-1260(2013).