Stem-loop sequence stu-MIR172c

AccessionMI0025958 (change log)
DescriptionSolanum tuberosum miR172c stem-loop
Gene family MIPF0000035; MIR172
Literature search

10 open access papers mention stu-MIR172c
(52 sentences)

Stem-loop
   --      u         a    gauuuau     au        ccacg     - ug  ag          a 
5'   agcauc ucaagauuc caua       auaau  auagaguu     auggg g  aa  ugauuaauua u
     |||||| ||||||||| ||||       |||||  ||||||||     ||||| |  ||  ||||||||||  
3'   ucguag aguucuaag gugu       uauua  uaucucgg     uaucc c  uu  auuaauuaau a
   cg      u         a    -aguuuu     au        uuaua     u gu  -a          u 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (SolTub3.0; GCA_000226075.1) Overlapping transcripts
JH137874.1: 229149-229293 [-]
intergenic
Database links

Mature sequence stu-miR172c-5p

Accession MIMAT0031288
Sequence

1 - 

agcaucuucaagauucaca

 - 19

Get sequence
Evidence experimental; Illumina [1]

Mature sequence stu-miR172c-3p

Accession MIMAT0031289
Sequence

127 - 

agaaucuugaugaugcugc

 - 145

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).