Stem-loop sequence stu-MIR5304

Accession

MI0025883 (change log)

Description

Solanum tuberosum miR5304 stem-loop

Gene family

MIPF0001713; MIR5304

Stem-loop

   --       a          a  acau         caug 
5'   caaugca cauacucauc cc    cuuucaucu    u
     ||||||| |||||||||| ||    |||||||||     
3'   guuacgu guaugaguag gg    gaaaguaga    g
   ag       g          a  cauu         aaac 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (SolTub3.0; GCA_000226075.1): JH138090.1: 77646-77725 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025883

Mature sequence stu-miR5304-5p

• Accession: MIMAT0030974
• Sequence: 1 - caaugcaacauacucaucacc - 21
• Evidence: experimental; Illumina [1]

Mature sequence stu-miR5304-3p

• Accession: MIMAT0031236
• Sequence: 60 - agaugaguauggugcauugga - 80
• Evidence: experimental; Illumina [1]

References

1. PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).