Stem-loop sequence bta-mir-7865

AccessionMI0025545 (change log)
DescriptionBos taurus miR-7865 stem-loop
Stem-loop
   ---ca   a    --a  gg    -     gu 
5'      ggg gggc   gg  aggg aggcu  g
        ||| ||||   ||  |||| |||||  u
3'      ccc cccg   uc  uccc uccgg  g
   ggacg   -    ccg  ag    g     ac 
Get sequence
Deep sequencing
374 reads, 0 reads per million, 65 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr18: 62973115-62973174 [+]
sense
ENSBTAT00000042918 ; PPP6R1-202; intron 1
ENSBTAT00000066016 ; PPP6R1-201; intron 13
Database links

Mature sequence bta-miR-7865

Accession MIMAT0030450
Sequence

1 - 

cagggagggcaggggaggg

 - 19

Get sequence
Deep sequencing7 reads, 6 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:23472090 "Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection" Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ PLoS One. 8:e57543(2013).