Stem-loop sequence oar-mir-30d

AccessionMI0025280 (change log)
DescriptionOvis aries miR-30d stem-loop
Gene family MIPF0000005; mir-30
Literature search

3 open access papers mention oar-mir-30d
(6 sentences)

Stem-loop
   guu  u         ccc           guacca 
5'    gu guaaacauc   gacuggaagcu      c
      || |||||||||   |||||||||||       
3'    cg cguuuguag   cugacuuucga      a
   cau  u         --a           aucgac 
Get sequence
Deep sequencing
182193 reads, 3.74e+04 reads per million, 13 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Oar_v4.0; GCA_000298735.2) Overlapping transcripts
chr9: 19937109-19937178 [+]
intergenic
Clustered miRNAs
< 10kb from oar-mir-30d
oar-mir-30dchr9: 19937109-19937178 [+]
oar-mir-30bchr9: 19941548-19941635 [+]
Database links

Mature sequence oar-miR-30d

Accession MIMAT0030059
Sequence

6 - 

uguaaacauccccgacugg

 - 24

Get sequence
Deep sequencing181538 reads, 13 experiments
Evidence experimental; cloned [1]

References

1
PMID:23269700 "MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200" Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E Physiol Genomics. 45:151-161(2013).