Stem-loop sequence oar-mir-200a

AccessionMI0025264 (change log)
DescriptionOvis aries miR-200a stem-loop
Gene family MIPF0000019; mir-8
Literature search

7 open access papers mention oar-mir-200a
(11 sentences)

Stem-loop
      - c   g        -             c    uuuc     
5' ggg c ucu uggacauc uuaccggacagug ugga    ucgg 
   ||| | ||| |||||||| ||||||||||||| ||||    ||| c
3' ccc g gga acuuguag aauggucugucac aucu    agcu 
      a u   a        c             a    ---c     
Get sequence
Deep sequencing
33432 reads, 9.01e+03 reads per million, 13 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Oar_v4.0; GCA_000298735.2) Overlapping transcripts
chr12: 49326773-49326858 [-]
intergenic
Clustered miRNAs
< 10kb from oar-mir-200a
oar-mir-200bchr12: 49327356-49327414 [-]
oar-mir-200achr12: 49326773-49326858 [-]
Database links

Mature sequence oar-miR-200a

Accession MIMAT0030042
Sequence

53 - 

aacacugucugguaacgau

 - 71

Get sequence
Deep sequencing33308 reads, 13 experiments
Evidence experimental; cloned [1]

References

1
PMID:23269700 "MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200" Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E Physiol Genomics. 45:151-161(2013).