Stem-loop sequence oar-mir-106b

AccessionMI0025249 (change log)
DescriptionOvis aries miR-106b stem-loop
Gene family MIPF0000001; mir-17
Literature search

1 open access papers mention oar-mir-106b
(2 sentences)

Stem-loop 
        c     -ua       g       a a     guc 
5' ccugc ggggc   aagugcu acagugc g uagug   c
   ||||| |||||   ||||||| ||||||| | |||||    
3' ggacg ccucg   uucaugg ugucacg c aucgu   u
        a     ucg       g       c -     gug
Get sequence
Deep sequencing
35947 reads, 7.12e+03 reads per million, 13 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Oar_v4.0; GCA_000298735.2) Overlapping transcripts
chr24: 36244122-36244201 [+]
sense
ENSOART00000019374 ; MCM7-201; intron 14
Clustered miRNAs
< 10kb from oar-mir-106b
oar-mir-106bchr24: 36244122-36244201 [+]
oar-mir-25chr24: 36244530-36244613 [+]
Database links

Mature sequence oar-miR-106b

Accession MIMAT0030028
Sequence

12 -  

uaaagugcugacagugcagau

 - 32

Get sequence
Deep sequencing33959 reads, 13 experiments
Evidence experimental; cloned [1]

References

1
PMID:23269700 "MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200" Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E Physiol Genomics. 45:151-161(2013).