Stem-loop sequence mdo-mir-7398d

AccessionMI0024033 (change log)
DescriptionMonodelphis domestica miR-7398d stem-loop
Gene family MIPF0001643; mir-7398
Stem-loop
   --u   u       -   aaaua     u uu 
5'    gug agaagca gga     ugccg g  u
      ||| ||||||| |||     ||||| |   
3'    cac ucuucgu ccu     auggu c  u
   ugc   -       u   ---aa     u ua 
Get sequence
Deep sequencing
1412 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MonDom5; GCF_000002295.2) Overlapping transcripts
chrX: 57297721-57297779 [+]
intergenic
Clustered miRNAs
< 10kb from mdo-mir-7398d
mdo-mir-7398cchrX: 57288057-57288117 [+]
mdo-mir-7398bchrX: 57288723-57288783 [+]
mdo-mir-7398vchrX: 57289402-57289462 [+]
mdo-mir-7398a-2chrX: 57291703-57291761 [+]
mdo-mir-7398a-4chrX: 57292644-57292702 [+]
mdo-mir-7398a-3chrX: 57293442-57293500 [+]
mdo-mir-7398a-5chrX: 57293921-57293979 [+]
mdo-mir-7398wchrX: 57294562-57294624 [+]
mdo-mir-7398pchrX: 57296466-57296526 [+]
mdo-mir-7398qchrX: 57297040-57297098 [+]
mdo-mir-7398dchrX: 57297721-57297779 [+]
mdo-mir-7398schrX: 57298336-57298390 [+]
mdo-mir-7398uchrX: 57301459-57301516 [+]
mdo-mir-7398jchrX: 57306266-57306324 [+]
Database links

Mature sequence mdo-miR-7398d-5p

Accession MIMAT0028922
Sequence

1 - 

uguguagaagcaggaaaauaugcc

 - 24

Get sequence
Deep sequencing243 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

Mature sequence mdo-miR-7398d-3p

Accession MIMAT0028923
Sequence

39 - 

uaaauccuugcuucucaccgu

 - 59

Get sequence
Deep sequencing1169 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).